chr3 : 111,863,555 111,863,748
193 bp 19 TFs 2 linked genes
This 193 bp open chromatin element is linked to ENSG00000286492 and PHLDB2 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286492 2.8 kb Proximal Proximity
PHLDB2 3.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:111,858,555 – 111,868,748
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
BRD4 6 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 146 bp overlap
ChIP MDA-MB-231_JQ1-neg_L GSE136151.BRD4.MDA-MB-231_JQ1-neg_L 163 bp overlap
ChIP MDA-MB-231_JQ1-neg_S_3f GSE136151.BRD4.MDA-MB-231_JQ1-neg_S_3f 87 bp overlap
ChIP SUM159PT_DMSO_48h GSE87418.BRD4.SUM159PT_DMSO_48h 94 bp overlap
ChIP SUM159PT_Dox_48h GSE87418.BRD4.SUM159PT_Dox_48h 85 bp overlap
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 182 bp overlap
CEBPB 1 dataset
ChIP HCT116 ENCFF097OLY 193 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 76 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1 GSE119930.FOXA1.CFPAC-1 114 bp overlap
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 79 bp overlap
ChIP liver ERP002306.FOXA1.liver 73 bp overlap
FOXA2 8 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 93 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 85 bp overlap
ChIP DE DE-FOXA2-1 193 bp overlap
ChIP DE DE-FOXA2-2 193 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 90 bp overlap
ChIP PANC-1 GSE119930.FOXA2.PANC-1 95 bp overlap
ChIP PANC-1_HNF1B-OE GSE119930.FOXA2.PANC-1_HNF1B-OE 122 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 94 bp overlap
FOXL2 4 datasets
ChIP HGrC1_C134W-TGF GSE138496.FOXL2.HGrC1_C134W-TGF 134 bp overlap
ChIP HGrC1_C134W-TGF_parental GSE138496.FOXL2.HGrC1_C134W-TGF_parental 144 bp overlap
ChIP KGN_1513 GSE138496.FOXL2.KGN_1513 86 bp overlap
ChIP SVOG-3e_DOX-WT GSE126171.FOXL2.SVOG-3e_DOX-WT 166 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 193 bp overlap
ChIP DE DE-GATA4-2 193 bp overlap
ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 74 bp overlap
ChIP foregut GSE117136.GATA4.foregut 193 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 193 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 193 bp overlap
ChIP DE DE-GATA6-2 193 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 193 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 193 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 193 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 193 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 193 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 193 bp overlap
ChIP foregut GSE117136.GATA6.foregut 193 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 193 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_shNR3C1_Veh_IA1 GSE125623.NR3C1.BEAS-2B_shNR3C1_Veh_IA1 75 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 193 bp overlap
PHIP 1 dataset
ChIP HCT-116_ab834 GSE101646.PHIP.HCT-116_ab834 180 bp overlap
POLR2A 1 dataset
ChIP HeLa-S3 ENCFF455YYQ 171 bp overlap
PRDM1 1 dataset
ChIP HEK293 ENCFF302TBP 193 bp overlap
PSIP1 1 dataset
ChIP T-REx-293 GSE117155.PSIP1.T-REx-293 193 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 193 bp overlap
SMARCA4 2 datasets
ChIP A-549_AG15689 GSE132290.SMARCA4.A-549_AG15689 149 bp overlap
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 86 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 193 bp overlap
SUPT6H 1 dataset
ChIP HCT-116 GSE130509.SUPT6H.HCT-116 193 bp overlap
TBX5 2 datasets
ChIP cardiomyocyte_5 GSE85628.TBX5.cardiomyocyte_5 133 bp overlap
ChIP cardiomyocyte_7 GSE85628.TBX5.cardiomyocyte_7 118 bp overlap