chr3 : 99,642,136 99,642,312
176 bp 18 TFs 1 linked gene
This 176 bp open chromatin element is linked to COL8A1 and is bound by 18 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
COL8A1 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:99,637,136 – 99,647,312
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS GSE108025.ARID2.Aska-SS 173 bp overlap
BRD4 1 dataset
ChIP SUM159PT_shMYC_DMSO_48h GSE87418.BRD4.SUM159PT_shMYC_DMSO_48h 176 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 126 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 176 bp overlap
ChIP DE DE-FOXA2-2 176 bp overlap
ChIP KerCT GSE90454.FOXA2.KerCT 125 bp overlap
GATA2 1 dataset
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 61 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 160 bp overlap
ChIP DE DE-GATA4-2 176 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 176 bp overlap
ChIP DE DE-GATA6-2 176 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 56 bp overlap
IKZF1 1 dataset
ChIP GM12878 ENCFF753XDO 176 bp overlap
IKZF2 3 datasets
ChIP GM12878 ENCFF238LYK 176 bp overlap
ChIP GM12878 ENCFF918AID 176 bp overlap
ChIP GM12878 ENCSR680UQE.IKZF2.GM12878 176 bp overlap
MED1 2 datasets
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 176 bp overlap
ChIP hMSC-TERT4_osteoblast-D7 GSE113253.MED1.hMSC-TERT4_osteoblast-D7 83 bp overlap
MTA2 2 datasets
ChIP GM12878 ENCFF615CWQ 164 bp overlap
ChIP GM12878 ENCSR293QAR.MTA2.GM12878 176 bp overlap
POLR2A 1 dataset
ChIP endothelial cell of umbilical vein ENCFF467WJF 176 bp overlap
RELB 1 dataset
ChIP GM12878 ENCSR387QUV.RELB.GM12878 133 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 128 bp overlap
SMARCA4 2 datasets
ChIP Aska-SS_shSSX GSE108025.SMARCA4.Aska-SS_shSSX 55 bp overlap
ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 54 bp overlap
SPI1 1 dataset
ChIP Kasumi-1_SICTR GSE60130.SPI1.Kasumi-1_SICTR 73 bp overlap
SS18 2 datasets
ChIP Aska-SS GSE108025.SS18.Aska-SS 176 bp overlap
ChIP SYO-1 GSE108025.SS18.SYO-1 176 bp overlap
TBX21 2 datasets
ChIP GM12878 ENCFF951HUW 126 bp overlap
ChIP GM12878 ENCSR739IHN.TBX21.GM12878 176 bp overlap