Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

35 transcription factors

AR 1 dataset

ChIP LNCaP GSE80256.AR.LNCaP 237 bp overlap

CDX2 1 dataset

ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 129 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF460KDD 324 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 363 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 328 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 568 bp overlap

ChIP DE DE-FOXA2-2 568 bp overlap

FOXH1 2 datasets

Motif DE_36h DE_36h-FOXH1_MA0479.2 8 bp overlap

Motif DE_60h DE_60h-FOXH1_MA0479.2 8 bp overlap

FOXO1-PAX3 1 dataset

ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 189 bp overlap

GATA1::TAL1 2 datasets

Motif DE_36h DE_36h-GATA1TAL1_MA0140.3 17 bp overlap

Motif DE_60h DE_60h-GATA1TAL1_MA0140.3 17 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 535 bp overlap

ChIP DE DE-GATA4-2 568 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 523 bp overlap

ChIP DE DE-GATA6-2 563 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 469 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 541 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 409 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 559 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 559 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 539 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 497 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 429 bp overlap

MEIS1 2 datasets

Motif DE_36h DE_36h-MEIS1_MA0498.3 5 bp overlap

Motif DE_60h DE_60h-MEIS1_MA0498.3 5 bp overlap

MXI1 2 datasets

Motif DE_36h DE_36h-MXI1_MA1108.3 6 bp overlap

Motif DE_60h DE_60h-MXI1_MA1108.3 6 bp overlap

NANOG 2 datasets

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 189 bp overlap

ChIP hESC GSE18292.NANOG.hESC 93 bp overlap

NR1D1 2 datasets

Motif DE_36h DE_36h-NR1D1_MA1531.2 14 bp overlap

Motif DE_60h DE_60h-NR1D1_MA1531.2 14 bp overlap

NR1D2 2 datasets

Motif DE_36h DE_36h-NR1D2_MA1532.2 15 bp overlap

Motif DE_60h DE_60h-NR1D2_MA1532.2 15 bp overlap

NR1H4::RXRA 2 datasets

Motif DE_36h DE_36h-NR1H4RXRA_MA1146.2 13 bp overlap

Motif DE_60h DE_60h-NR1H4RXRA_MA1146.2 13 bp overlap

Nr2F6 2 datasets

Motif DE_36h DE_36h-Nr2F6_MA0728.1 15 bp overlap

Motif DE_60h DE_60h-Nr2F6_MA0728.1 15 bp overlap

Prdm15 1 dataset

Motif DE_60h DE_60h-Prdm15_MA1616.2 11 bp overlap

RARA 2 datasets

Motif DE_36h DE_36h-RARA_MA0729.1 18 bp overlap

Motif DE_60h DE_60h-RARA_MA0729.1 18 bp overlap

SMAD2 1 dataset

ChIP endoderm GSE29422.SMAD2.endoderm 349 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 548 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 545 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 430 bp overlap

SMAD2_3 4 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 397 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 521 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 523 bp overlap

ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 568 bp overlap

SMAD3 1 dataset

ChIP endoderm GSE29422.SMAD3.endoderm 320 bp overlap

SMAD3-HIF1A 1 dataset

ChIP PC-3_hypoxia GSE106305.SMAD3-HIF1A.PC-3_hypoxia 174 bp overlap

SMAD4 1 dataset

ChIP endoderm GSE29422.SMAD4.endoderm 321 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 342 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 509 bp overlap

SUZ12 1 dataset

ChIP K-562 ENCSR000AUC.SUZ12.K-562 179 bp overlap

Tfcp2l1 2 datasets

Motif DE_36h DE_36h-Tfcp2l1_MA0145.2 14 bp overlap

Motif DE_60h DE_60h-Tfcp2l1_MA0145.2 14 bp overlap

YY1 1 dataset

ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 354 bp overlap

ZNF18 1 dataset

ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 146 bp overlap

ZNF214 2 datasets

Motif DE_36h DE_36h-ZNF214_MA1975.2 13 bp overlap

Motif DE_60h DE_60h-ZNF214_MA1975.2 13 bp overlap

ZNF317 1 dataset

ChIP HEK293 GSE76494.ZNF317.HEK293 137 bp overlap

Genome Browser