chr3 : 17,745,386 17,745,580
194 bp 20 TFs 2 linked genes
This 194 bp open chromatin element is linked to ENSG00000286352 and TBC1D5 and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000286352 2.4 kb Proximal Proximity
TBC1D5 2.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:17,740,386 – 17,750,580
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 100 bp overlap
ChIP MCF-7 ENCFF414SZG 163 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCSR234VCE.DPF2.MCF-7 164 bp overlap
E2F6 2 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 142 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 139 bp overlap
FOXA1 1 dataset
ChIP primary-breast-cancer_B1_DSG GSE114737.FOXA1.primary-breast-cancer_B1_DSG 167 bp overlap
GRHL2 6 datasets
ChIP LNCaP GSE80256.GRHL2.LNCaP 194 bp overlap
ChIP MCF-7 GSE109820.GRHL2.MCF-7 155 bp overlap
ChIP MCF-7 GSE99680.GRHL2.MCF-7 149 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 194 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 156 bp overlap
ChIP T-47D GSE99680.GRHL2.T-47D 143 bp overlap
KMT2A 1 dataset
ChIP Hep-G2 ENCSR692GFR.KMT2A.Hep-G2 134 bp overlap
L3MBTL2 2 datasets
ChIP K-562 ENCSR530XQI.L3MBTL2.K-562 103 bp overlap
ChIP K562 ENCFF320EQC 194 bp overlap
MAX 2 datasets
ChIP Hep-G2 ENCSR168DYA.MAX.Hep-G2 145 bp overlap
ChIP MCF-7 ENCSR000BUL.MAX.MCF-7 90 bp overlap
MGA 1 dataset
ChIP K562 ENCFF140CEX 194 bp overlap
MYC 1 dataset
ChIP MCF-7 ENCSR000DMQ.MYC.MCF-7 141 bp overlap
NUTM1 1 dataset
ChIP embryonic-kidney_induced GSE133122.NUTM1.embryonic-kidney_induced 194 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 194 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 194 bp overlap
RELA 2 datasets
ChIP MCF-7_IL1b_45m GSE67295.RELA.MCF-7_IL1b_45m 194 bp overlap
ChIP SGBS_TNF GSE64233.RELA.SGBS_TNF 121 bp overlap
TCF4 1 dataset
ChIP CAL-1 GSE76147.TCF4.CAL-1 76 bp overlap
TP63 1 dataset
ChIP keratinocyte_epidermal GSE67382.TP63.keratinocyte_epidermal 149 bp overlap
USF1 12 datasets
ChIP H1 ENCFF090WVU 183 bp overlap
ChIP HCT116 ENCFF330PYP 194 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 135 bp overlap
ChIP HepG2 ENCFF201JKA 144 bp overlap
ChIP HepG2 ENCFF807KYJ 181 bp overlap
ChIP Ishikawa ENCFF728IEG 192 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 146 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 184 bp overlap
ChIP K562 ENCFF202SFC 194 bp overlap
ChIP K562 ENCFF633EZB 192 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 130 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 194 bp overlap
USF2 2 datasets
ChIP Hep-G2 GSE97661.USF2.Hep-G2 183 bp overlap
ChIP K562 ENCFF397QGU 194 bp overlap