chr3 : 13,157,648 13,158,706
1,058 bp 19 TFs 2 linked genes
This 1.1 kb open chromatin element is linked to IQSEC1 and NUP210 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
IQSEC1 125.1 kb Distal Multiome
NUP210 262.1 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr3:13,152,648 – 13,163,706
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ATF3 1 dataset
ChIP HCT-116_CAMP GSE74355.ATF3.HCT-116_CAMP 115 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF093OYK 251 bp overlap
ChIP BLaER1 ENCFF274GAT 92 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 298 bp overlap
EZH2 1 dataset
ChIP SU-DHL-6 GSE134136.EZH2.SU-DHL-6 337 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 215 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 1058 bp overlap
ChIP DE DE-FOXA2-2 1058 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 244 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 462 bp overlap
ChIP DE DE-GATA4-2 591 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 464 bp overlap
ChIP DE DE-GATA6-2 730 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 273 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 302 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 303 bp overlap
HNF4A 1 dataset
ChIP gastric-epithelial-cell_OE GSE114018.HNF4A.gastric-epithelial-cell_OE 164 bp overlap
NANOG 2 datasets
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 297 bp overlap
ChIP hESC GSE18292.NANOG.hESC 93 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 884 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 262 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 472 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 349 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 829 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 542 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 351 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 991 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 361 bp overlap
STAT3 1 dataset
ChIP A139 GSE85579.STAT3.A139 303 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 183 bp overlap
TRIM28 1 dataset
ChIP hESC GSE115387.TRIM28.hESC 154 bp overlap