chr2 : 200,939,422 200,939,810
388 bp 21 TFs 0 linked genes
This 388 bp open chromatin element has no linked target genes and is bound by 21 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:200,934,422 – 200,944,810
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
AR 2 datasets
ChIP VCaP GSE148358.AR.VCaP 382 bp overlap
ChIP VCaP_DHAT_2H GSE28950.AR.VCaP_DHAT_2H 127 bp overlap
BAF155 1 dataset
ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 388 bp overlap
DUX4 2 datasets
ChIP HEK293 GSE75791.DUX4.HEK293 67 bp overlap
ChIP WA01 GSE94322.DUX4.WA01 123 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 267 bp overlap
ChIP MCF-7_E2-40min-ERalpha GSE94023.ESR1.MCF-7_E2-40min-ERalpha 133 bp overlap
ChIP MCF-7_SHFOXA1_E2 ERP000380.ESR1.MCF-7_SHFOXA1_E2 102 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 267 bp overlap
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 249 bp overlap
ChIP MCF-7_shYAP1 GSE125594.ESR1.MCF-7_shYAP1 85 bp overlap
FOXA1 1 dataset
ChIP MCF-7 GSE81714.FOXA1.MCF-7 291 bp overlap
FOXA2 6 datasets
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 133 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 191 bp overlap
ChIP BJ1-hTERT_GATA4 GSE90454.FOXA2.BJ1-hTERT_GATA4 182 bp overlap
ChIP Caco-2 GSE66218.FOXA2.Caco-2 97 bp overlap
ChIP DE DE-FOXA2-1 388 bp overlap
ChIP DE DE-FOXA2-2 388 bp overlap
GATA1 10 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 132 bp overlap
ChIP CD34_ERYTH_BIO GSE29194.GATA1.CD34_ERYTH_BIO 230 bp overlap
ChIP CD34_ERYTH_BMP GSE29194.GATA1.CD34_ERYTH_BMP 240 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 179 bp overlap
ChIP K-562 GSE107726.GATA1.K-562 206 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 136 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 164 bp overlap
ChIP erythroid_Don001 GSE137982.GATA1.erythroid_Don001 252 bp overlap
ChIP erythroid_Don002 GSE137982.GATA1.erythroid_Don002 212 bp overlap
ChIP erythroid_Don003 GSE137982.GATA1.erythroid_Don003 249 bp overlap
GATA2 2 datasets
ChIP CD34_ACY957 GSE60792.GATA2.CD34_ACY957 361 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 123 bp overlap
GATA3 6 datasets
ChIP MCF-7_E2 GSE60270.GATA3.MCF-7_E2 209 bp overlap
ChIP MCF-7_E2 GSE81510.GATA3.MCF-7_E2 388 bp overlap
ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 134 bp overlap
ChIP MCF-7_E2_Dex GSE81510.GATA3.MCF-7_E2_Dex 231 bp overlap
ChIP MCF-7_ICI GSE81510.GATA3.MCF-7_ICI 228 bp overlap
ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 170 bp overlap
GATA4 10 datasets
ChIP A-549 GSE85002.GATA4.A-549 188 bp overlap
ChIP BJ1-hTERT GSE92491.GATA4.BJ1-hTERT 275 bp overlap
ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 241 bp overlap
ChIP DE DE-GATA4-1 388 bp overlap
ChIP DE DE-GATA4-2 388 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 388 bp overlap
ChIP YCC-3 GSE51705.GATA4.YCC-3 333 bp overlap
ChIP foregut GSE117136.GATA4.foregut 388 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 388 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 282 bp overlap
GATA6 14 datasets
ChIP AGS GSE51705.GATA6.AGS 330 bp overlap
ChIP Caco-2_PROLIF GSE23436.GATA6.Caco-2_PROLIF 388 bp overlap
ChIP DE DE-GATA6-1 388 bp overlap
ChIP DE DE-GATA6-2 388 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 311 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 214 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 388 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 290 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 350 bp overlap
ChIP YCC-3 GSE51705.GATA6.YCC-3 388 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 388 bp overlap
ChIP foregut GSE117136.GATA6.foregut 306 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 285 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 388 bp overlap
GRHL2 3 datasets
ChIP MCF-7 GSE109820.GRHL2.MCF-7 175 bp overlap
ChIP MCF-7-WS8_VEH GSE113092.GRHL2.MCF-7-WS8_VEH 198 bp overlap
ChIP MCF-7_E2_45min GSE109820.GRHL2.MCF-7_E2_45min 159 bp overlap
HNF4A 1 dataset
ChIP Caco-2_DIFF GSE23436.HNF4A.Caco-2_DIFF 109 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 141 bp overlap
NFE2 1 dataset
ChIP ProEs GSE59087.NFE2.ProEs 131 bp overlap
SMAD1 1 dataset
ChIP CD34_PROG_BMP GSE29194.SMAD1.CD34_PROG_BMP 145 bp overlap
SOX11 1 dataset
ChIP GRANT-A519 GSE52146.SOX11.GRANT-A519 52 bp overlap
TAL1 2 datasets
ChIP CD34 GSE52924.TAL1.CD34 186 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 150 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 223 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 222 bp overlap