chr2 : 161,421,806 161,422,147
341 bp 12 TFs 4 linked genes
This 341 bp open chromatin element is linked to 4 target genes and is bound by 12 transcription factors.
Linked Genes
4 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000224076 1.4 kb Proximal Proximity
ENSG00000251621 1.9 kb Proximal Proximity
SLC4A10 2.2 kb Proximal Proximity
TBR1 4.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:161,416,806 – 161,427,147
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
EZH2 6 datasets
ChIP GM23338 ENCFF613YON 311 bp overlap
ChIP H1 ENCFF232NZA 341 bp overlap
ChIP fibroblast_LUNG ENCSR000ARO.EZH2.fibroblast_LUNG 327 bp overlap
ChIP keratinocyte ENCSR000ARK.EZH2.keratinocyte 341 bp overlap
ChIP neural progenitor cell ENCFF018MKA 341 bp overlap
ChIP neural progenitor cell ENCFF472NFV 341 bp overlap
GATA6 6 datasets
ChIP DE_D1 S09-DE-d1-GATA6-exp1 246 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 311 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 341 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 203 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 341 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 341 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 341 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 169 bp overlap
PCGF1 1 dataset
ChIP WA01 GSE104690.PCGF1.WA01 264 bp overlap
PCGF2 1 dataset
ChIP fibroblast_OHT GSE55605.PCGF2.fibroblast_OHT 249 bp overlap
POU5F1 1 dataset
ChIP HUES-8 GSE109524.POU5F1.HUES-8 341 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 341 bp overlap
SP1 1 dataset
ChIP WA01 ENCSR000BIR.SP1.WA01 130 bp overlap
SUZ12 3 datasets
ChIP GM12878 ENCSR091BOQ.SUZ12.GM12878 54 bp overlap
ChIP H1 ENCFF881NFR 341 bp overlap
ChIP WA01 ENCSR000ATS.SUZ12.WA01 52 bp overlap
TCF12 2 datasets
ChIP H1 ENCFF203EBH 174 bp overlap
ChIP WA01 ENCSR000BIT.TCF12.WA01 161 bp overlap