chr2 : 69,435,560 69,435,948
388 bp 24 TFs 1 linked gene
This 388 bp open chromatin element is linked to NFU1 and is bound by 24 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
NFU1 1.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:69,430,560 – 69,440,948
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
24 transcription factors
Source
Cell type
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 278 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 348 bp overlap
ChIP DE DE-FOXA2-2 277 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 388 bp overlap
ChIP DE DE-GATA4-2 388 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 383 bp overlap
ChIP DE DE-GATA6-2 388 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 350 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 348 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 289 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 388 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 380 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 377 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 237 bp overlap
IKZF1 1 dataset
ChIP pre-B-cell GSE107886.IKZF1.pre-B-cell 221 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 168 bp overlap
KLF16 1 dataset
ChIP HEK293 ENCSR397DQC.KLF16.HEK293 177 bp overlap
KLF4 1 dataset
ChIP BJ_INDUCED GSE36570.KLF4.BJ_INDUCED 124 bp overlap
NKX2-1 1 dataset
ChIP H9_derived-cIN GSE99937.NKX2-1.H9_derived-cIN 78 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 228 bp overlap
REST 1 dataset
ChIP neural ENCSR000BTV.REST.neural 144 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 133 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 388 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 350 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 204 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 193 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 260 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 334 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 346 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 281 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 388 bp overlap
SOX2 1 dataset
ChIP HNSC GSE69479.SOX2.HNSC 216 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 213 bp overlap
ZNF384 1 dataset
ChIP HEK293T ENCFF019DZX 250 bp overlap
ZNF460 2 datasets
ChIP HepG2 ENCFF007NNM 312 bp overlap
ChIP HepG2 ENCFF007NNM 113 bp overlap
ZNF485 1 dataset
ChIP HepG2 ENCFF360UPH 302 bp overlap
ZNF816 1 dataset
ChIP HepG2 ENCFF294VPD 234 bp overlap
ZNF823 1 dataset
ChIP HEK293T GSE78099.ZNF823.HEK293T 61 bp overlap