chr2 : 38,085,966 38,086,623
657 bp 38 TFs 2 linked genes
This 657 bp open chromatin element is linked to CYP1B1-AS1 and CYP1B1 and is bound by 38 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CYP1B1-AS1 9.7 kb Proximal Proximity
CYP1B1 9.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr2:38,080,966 – 38,091,623
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
38 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP HCT-15 GSE73319.BRD4.HCT-15 150 bp overlap
CHD4 1 dataset
ChIP SCMC GSE155861.CHD4.SCMC 75 bp overlap
CTCF 1 dataset
Motif DE_72h DE_72h-CTCF_MA1929.2 31 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 135 bp overlap
FERD3L 1 dataset
Motif DE_72h DE_72h-FERD3L_MA1485.1 14 bp overlap
FIGLA 1 dataset
Motif DE_72h DE_72h-FIGLA_MA0820.2 6 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 361 bp overlap
ChIP DE DE-FOXA2-2 371 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 527 bp overlap
ChIP DE DE-GATA4-2 436 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 389 bp overlap
ChIP DE DE-GATA6-2 425 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 424 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 306 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 261 bp overlap
JUN 2 datasets
ChIP DE_D1 S40-DE-d1-JUN-exp2 577 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 470 bp overlap
KLF13 1 dataset
Motif DE_72h DE_72h-KLF13_MA0657.2 17 bp overlap
MYOD1 1 dataset
Motif DE_72h DE_72h-MYOD1_MA0499.3 9 bp overlap
NANOG 5 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 297 bp overlap
ChIP WA01 ERP004238.NANOG.WA01 203 bp overlap
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 276 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 266 bp overlap
ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 233 bp overlap
NUTM1 1 dataset
ChIP NUT_DMSO GSE133122.NUTM1.NUT_DMSO 235 bp overlap
Nfat5 1 dataset
Motif DE_72h DE_72h-Nfat5_MA0606.3 8 bp overlap
Nfatc2 1 dataset
Motif DE_72h DE_72h-Nfatc2_MA0152.3 8 bp overlap
PHOX2B 1 dataset
Motif DE_72h DE_72h-PHOX2B_MA0681.3 12 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 311 bp overlap
Ptf1A 1 dataset
Motif DE_72h DE_72h-Ptf1A_MA1620.2 8 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 332 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 333 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 308 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 343 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE21614.SMAD3.BG03 142 bp overlap
SNAI2 1 dataset
Motif DE_72h DE_72h-SNAI2_MA0745.3 8 bp overlap
SNAI3 1 dataset
Motif DE_72h DE_72h-SNAI3_MA1559.2 9 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 269 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 368 bp overlap
SUPT5H 2 datasets
ChIP DLD-1_NELFCD-AID GSE144786.SUPT5H.DLD-1_NELFCD-AID 272 bp overlap
ChIP DLD-1_NELFE-AID_treated GSE144786.SUPT5H.DLD-1_NELFE-AID_treated 144 bp overlap
TBP 1 dataset
Motif DE_72h DE_72h-TBP_MA0108.3 7 bp overlap
VEZF1 1 dataset
Motif DE_72h DE_72h-VEZF1_MA1578.2 6 bp overlap
Wt1 2 datasets
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
Motif DE_72h DE_72h-Wt1_MA1627.2 10 bp overlap
ZEB1 1 dataset
Motif DE_72h DE_72h-ZEB1_MA0103.4 6 bp overlap
ZIC4 1 dataset
Motif DE_72h DE_72h-ZIC4_MA0751.2 14 bp overlap
ZNF667 1 dataset
Motif DE_72h DE_72h-ZNF667_MA1984.2 11 bp overlap
ZNF707 1 dataset
Motif DE_72h DE_72h-ZNF707_MA1715.1 15 bp overlap
ZNF784 1 dataset
Motif DE_72h DE_72h-ZNF784_MA1717.2 8 bp overlap
ZNF816 1 dataset
Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap
Zfp335 1 dataset
Motif DE_72h DE_72h-Zfp335_MA2002.2 7 bp overlap