chrX : 47,198,176 47,198,654
478 bp 34 TFs 2 linked genes
This 478 bp open chromatin element is linked to INE1 and UBA1 and is bound by 34 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
INE1 6.3 kb Proximal Proximity
UBA1 7.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:47,193,176 – 47,203,654
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
34 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4 GSE117734.ARID2.BIN-67_lentivirus-SMARCA4 222 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF460KDD 230 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 268 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 266 bp overlap
FOS 1 dataset
ChIP HCT-116_A7A GSE152144.FOS.HCT-116_A7A 478 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 478 bp overlap
ChIP DE DE-FOXA2-2 478 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 478 bp overlap
ChIP DE DE-GATA4-2 478 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 299 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 478 bp overlap
ChIP DE DE-GATA6-2 478 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 428 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 434 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 358 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 478 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 478 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 412 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 454 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 357 bp overlap
HOXA3 1 dataset
ChIP Hep-G2 ENCSR999JKC.HOXA3.Hep-G2 120 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 409 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 335 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 459 bp overlap
MYOG 1 dataset
ChIP RH30_DMSO GSE85169.MYOG.RH30_DMSO 221 bp overlap
NANOG 1 dataset
ChIP WA09 GSE105028.NANOG.WA09 301 bp overlap
NR2F2 2 datasets
ChIP liver ENCFF565JGD 152 bp overlap
ChIP liver ENCSR168SMX.NR2F2.liver 77 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 126 bp overlap
PGR 1 dataset
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 182 bp overlap
POU5F1 2 datasets
ChIP DE_D1 DED1-OCT4_Batch_II 413 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 404 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 435 bp overlap
SMAD2 4 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 404 bp overlap
ChIP hESC GSE29422.SMAD2.hESC 269 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 326 bp overlap
ChIP hESC_activinA_15h GSE99202.SMAD2.hESC_activinA_15h 439 bp overlap
SMAD2-3 4 datasets
ChIP HUES-8 GSE109524.SMAD2-3.HUES-8 478 bp overlap
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 478 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 478 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 478 bp overlap
SMAD2_3 7 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 478 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 478 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 478 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 478 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 478 bp overlap
ChIP ESC S23-ESC-d0-SMAD2_3-exp1 256 bp overlap
ChIP ESC S33-ESC-d0-SMAD2_3-exp2 391 bp overlap
SMAD3 4 datasets
ChIP BG03_DIFF_2H GSE36578.SMAD3.BG03_DIFF_2H 217 bp overlap
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 180 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 349 bp overlap
ChIP hESC GSE29422.SMAD3.hESC 178 bp overlap
SMAD4 2 datasets
ChIP endoderm GSE29422.SMAD4.endoderm 384 bp overlap
ChIP hESC GSE29422.SMAD4.hESC 185 bp overlap
SMARCA4 2 datasets
ChIP endometrial-epithelial-cells_KO GSE106660.SMARCA4.endometrial-epithelial-cells_KO 330 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 159 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 253 bp overlap
SPI1 1 dataset
ChIP primary-neutrophil_donorF GSE128834.SPI1.primary-neutrophil_donorF 106 bp overlap
SSRP1 1 dataset
ChIP HT-1080_AclacinomycinA GSE107595.SSRP1.HT-1080_AclacinomycinA 120 bp overlap
TEAD4 3 datasets
ChIP ESC S26-ESC-d0-TEAD4-exp1 385 bp overlap
ChIP H1 ENCFF778PAX 245 bp overlap
ChIP SNU-216 GSE44416.TEAD4.SNU-216 183 bp overlap
TP63 1 dataset
ChIP SUIT-2 GSE115461.TP63.SUIT-2 207 bp overlap
ZNF3 1 dataset
ChIP Hep-G2 ENCSR182QWU.ZNF3.Hep-G2 149 bp overlap
ZNF629 2 datasets
ChIP Hep-G2 ENCSR363ASY.ZNF629.Hep-G2 401 bp overlap
ChIP HepG2 ENCFF490FFQ 371 bp overlap
ZNF92 1 dataset
ChIP retina_pigment GSE60024.ZNF92.retina_pigment 256 bp overlap