chrX : 47,197,196 47,197,435
239 bp 26 TFs 2 linked genes
This 239 bp open chromatin element is linked to UBA1 and INE1 and is bound by 26 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
UBA1 6.3 kb Proximal Proximity
INE1 7.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:47,192,196 – 47,202,435
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
AR 1 dataset
ChIP PC-3_R1881 GSE54110.AR.PC-3_R1881 58 bp overlap
ARID2 1 dataset
ChIP BIN-67_lentivirus-SMARCA4-K785R GSE117734.ARID2.BIN-67_lentivirus-SMARCA4-K785R 153 bp overlap
BRD4 1 dataset
ChIP CLL_patient3_4h_CpG GSE109411.BRD4.CLL_patient3_4h_CpG 92 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 222 bp overlap
ChIP K562 ENCFF673OEZ 239 bp overlap
CTCF 1 dataset
ChIP GM13976 ENCFF896BYT 157 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 239 bp overlap
ChIP DE DE-FOXA2-2 239 bp overlap
GATA1 6 datasets
ChIP CD34_Day7_30min GSE104676.GATA1.CD34_Day7_30min 126 bp overlap
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 55 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 144 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 138 bp overlap
ChIP erythroblast ENCFF867JAR 239 bp overlap
ChIP erythroblast ENCSR000EXP.GATA1.erythroblast 239 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 239 bp overlap
ChIP DE DE-GATA4-2 239 bp overlap
ChIP foregut GSE117136.GATA4.foregut 239 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 239 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 239 bp overlap
ChIP DE DE-GATA6-2 239 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 217 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 239 bp overlap
ChIP foregut GSE117136.GATA6.foregut 239 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 239 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 239 bp overlap
HDAC2 1 dataset
ChIP K-562 ENCSR893WSB.HDAC2.K-562 164 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR908CMW.KDM1A.K-562 164 bp overlap
LDB1 1 dataset
ChIP HEP GSE52637.LDB1.HEP 159 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 123 bp overlap
MYNN 2 datasets
ChIP K-562 ENCSR737LTZ.MYNN.K-562 95 bp overlap
ChIP K562 ENCFF399UNK 156 bp overlap
NR2F2 1 dataset
ChIP K-562 ENCSR000BRS.NR2F2.K-562 156 bp overlap
NR2F6 1 dataset
ChIP K-562 ENCSR707QWA.NR2F6.K-562 233 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 182 bp overlap
PGR 2 datasets
ChIP T-47D_PROG GSE68355.PGR.T-47D_PROG 142 bp overlap
ChIP T-47D_R5020 GSE68355.PGR.T-47D_R5020 61 bp overlap
PKNOX1 4 datasets
ChIP GM12878 ENCFF589FCY 239 bp overlap
ChIP GM12878 ENCSR711XNY.PKNOX1.GM12878 239 bp overlap
ChIP K-562 ENCSR115SMW.PKNOX1.K-562 232 bp overlap
ChIP K562 ENCFF236IUS 171 bp overlap
POLR2A 2 datasets
ChIP GM12878 ENCFF263VRI 208 bp overlap
ChIP GM12878 ENCFF263VRI 239 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 239 bp overlap
SMARCA4 2 datasets
ChIP BIN-67_lentivirus-SMARCA4-T910M GSE117734.SMARCA4.BIN-67_lentivirus-SMARCA4-T910M 239 bp overlap
ChIP NSC GSE125033.SMARCA4.NSC 132 bp overlap
TAL1 4 datasets
ChIP CD34 GSE52924.TAL1.CD34 135 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 144 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 175 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 184 bp overlap
ZNF263 1 dataset
ChIP HepG2 ENCFF626SSV 112 bp overlap