Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

20 transcription factors

ASCL1 1 dataset

ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 188 bp overlap

BAF155 1 dataset

ChIP VCaP_shARID1A GSE110655.BAF155.VCaP_shARID1A 55 bp overlap

BRD4 2 datasets

ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 181 bp overlap

ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 206 bp overlap

CRX 4 datasets

ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 238 bp overlap

ChIP retina_Hu21 GSE137311.CRX.retina_Hu21 220 bp overlap

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 238 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 238 bp overlap

CTCF 3 datasets

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 238 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 238 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 238 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 159 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 238 bp overlap

ChIP DE DE-FOXA2-2 65 bp overlap

GATA2 2 datasets

ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 205 bp overlap

ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 157 bp overlap

GATA3 1 dataset

ChIP Kelly GSE94822.GATA3.Kelly 228 bp overlap

GATA4 2 datasets

ChIP DE DE-GATA4-1 238 bp overlap

ChIP DE DE-GATA4-2 238 bp overlap

GATA6 8 datasets

ChIP DE DE-GATA6-1 238 bp overlap

ChIP DE DE-GATA6-2 238 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 238 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 238 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 238 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 238 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 238 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 238 bp overlap

HAND2 2 datasets

ChIP CLB-Ga GSE90683.HAND2.CLB-Ga 162 bp overlap

ChIP Kelly GSE94822.HAND2.Kelly 164 bp overlap

MEF2D 2 datasets

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 238 bp overlap

ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 238 bp overlap

NEUROD1 5 datasets

ChIP D283-Med GSE92582.NEUROD1.D283-Med 238 bp overlap

ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 235 bp overlap

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 225 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 140 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 191 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 238 bp overlap

POLR2A 2 datasets

ChIP Peyer's patch ENCFF767HVN 167 bp overlap

ChIP Peyer's patch ENCFF990IYL 168 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 238 bp overlap

SMAD2-3 1 dataset

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 238 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 172 bp overlap

TBX2 1 dataset

ChIP Kelly GSE94822.TBX2.Kelly 194 bp overlap

Genome Browser