chrX : 33,465,244 – 33,465,429
185 bp 18 TFs 0 linked genes
This 185 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:33,460,244 – 33,470,429
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
CTCF 164 datasets
ChIP 22Rv1 ENCFF466OXN 185 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 185 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 185 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 185 bp overlap
ChIP BE2C ENCFF757SRF 185 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 185 bp overlap
ChIP C4-2B ENCFF821XVN 185 bp overlap
ChIP CUTLL1_DMSO GSE130140.CTCF.CUTLL1_DMSO 127 bp overlap
Motif DE_12h DE_12h-CTCF_MA1929.2 31 bp overlap
Motif DE_36h DE_36h-CTCF_MA1929.2 31 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 185 bp overlap
Motif ES_0h ES_0h-CTCF_MA1929.2 31 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 185 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 121 bp overlap
ChIP GM06077 GSE148179.CTCF.GM06077 185 bp overlap
ChIP GM12867 ENCSR000DRH.CTCF.GM12867 101 bp overlap
ChIP GM12868 ENCSR000DRI.CTCF.GM12868 182 bp overlap
ChIP GM12869 ENCSR000DRJ.CTCF.GM12869 170 bp overlap
ChIP GM12870 ENCSR000DRK.CTCF.GM12870 146 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 107 bp overlap
ChIP GM12873 ENCFF711LOS 185 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 170 bp overlap
ChIP GM12875 ENCSR000DRU.CTCF.GM12875 128 bp overlap
ChIP GM23338 ENCFF531QOI 185 bp overlap
ChIP GM23338 ENCFF772DML 178 bp overlap
ChIP GM23338 ENCFF832KWE 185 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 133 bp overlap
ChIP H1 ENCFF764RHO 185 bp overlap
ChIP H9 ENCFF152GTF 185 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 185 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 185 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 185 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 185 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 185 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 185 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 153 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 185 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 165 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 107 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 87 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 147 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 109 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 166 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 142 bp overlap
ChIP HEK293 ENCFF498RMM 185 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 185 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 178 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 100 bp overlap
ChIP HT-1080_CBL0137-6h GSE122462.CTCF.HT-1080_CBL0137-6h 185 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 63 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 185 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 185 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 181 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 170 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 185 bp overlap
ChIP HeLa-S3 ENCFF255ASZ 185 bp overlap
ChIP HeLa-S3 ENCFF565UFR 161 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 185 bp overlap
ChIP HeLa-S3 ENCSR000DUB.CTCF.HeLa-S3 174 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 185 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 185 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 126 bp overlap
ChIP IMR-90_Ctrl GSE125639.CTCF.IMR-90_Ctrl 185 bp overlap
ChIP K-562 GSE70482.CTCF.K-562 113 bp overlap
ChIP K-562 ENCSR000DWE.CTCF.K-562 171 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 154 bp overlap
ChIP K-562_12040 GSE131349.CTCF.K-562_12040 131 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 178 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 169 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 177 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 180 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 137 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 171 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 181 bp overlap
ChIP K-562_8004 GSE131349.CTCF.K-562_8004 136 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 178 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 109 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 185 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 175 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 168 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 185 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 185 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 185 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 185 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 119 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 138 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 185 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 185 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 109 bp overlap
ChIP OCI-LY1 ENCFF455ESK 185 bp overlap
ChIP OCI-LY1 ENCFF455ESK 69 bp overlap
ChIP OCI-LY7 ENCFF086AXQ 185 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 185 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 148 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 185 bp overlap
ChIP PC-9 ENCFF539ULB 185 bp overlap
ChIP PC-9 ENCFF539ULB 113 bp overlap
ChIP SEM GSE117864.CTCF.SEM 159 bp overlap
ChIP SK-N-SH ENCFF575DMG 160 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 185 bp overlap
ChIP SK-N-SH GSE76815.CTCF.SK-N-SH 185 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 116 bp overlap
ChIP SK-N-SH ENCSR000DXQ.CTCF.SK-N-SH 148 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 185 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 152 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 163 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 159 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 185 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 185 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 115 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 122 bp overlap
ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 144 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 185 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 185 bp overlap
ChIP WTC11 ENCFF658QVH 185 bp overlap
ChIP WTC11 ENCFF658QVH 106 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 124 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 93 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 171 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 185 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 185 bp overlap
ChIP endodermal cell ENCFF471YCZ 185 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 134 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 185 bp overlap
ChIP epithelial_mammary ENCSR000ALV.CTCF.epithelial_mammary 133 bp overlap
ChIP erythroid_Don002 GSE137982.CTCF.erythroid_Don002 140 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 121 bp overlap
ChIP gastrocnemius-medialis ENCSR355ALW.CTCF.gastrocnemius-medialis 185 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 184 bp overlap
ChIP glioblastoma_GBM3565 GSE139416.CTCF.glioblastoma_GBM3565 185 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 185 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 185 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 155 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 185 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 185 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 185 bp overlap
ChIP heart ENCSR778ZPK.CTCF.heart 185 bp overlap
ChIP heart ENCSR355PMV.CTCF.heart 185 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 171 bp overlap
ChIP heart left ventricle ENCFF505HGD 185 bp overlap
ChIP heart left ventricle ENCFF888ERQ 185 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 108 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 185 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 138 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 151 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 142 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 154 bp overlap
ChIP keratinocyte ENCFF667ULX 185 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 185 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 185 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 185 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 185 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 185 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 185 bp overlap
ChIP neural crest cell ENCFF182LWK 123 bp overlap
ChIP neural progenitor cell ENCFF420RBO 185 bp overlap
ChIP neural progenitor cell ENCFF581WPG 185 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 185 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 106 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 164 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 185 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 185 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 185 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 132 bp overlap
FOXD2 1 dataset
Motif DE_12h DE_12h-FOXD2_MA0847.4 11 bp overlap
FOXE1 1 dataset
Motif DE_12h DE_12h-FOXE1_MA1487.3 12 bp overlap
Foxq1 1 dataset
Motif DE_12h DE_12h-Foxq1_MA0040.2 10 bp overlap
MEIS1 1 dataset
Motif DE_12h DE_12h-MEIS1_MA0498.3 5 bp overlap
MEIS3 1 dataset
Motif DE_12h DE_12h-MEIS3_MA0775.2 7 bp overlap
NFKB1 3 datasets
Motif DE_12h DE_12h-NFKB1_MA0105.4 13 bp overlap
Motif DE_36h DE_36h-NFKB1_MA0105.4 13 bp overlap
Motif ES_0h ES_0h-NFKB1_MA0105.4 13 bp overlap
NR1H2::RXRA 1 dataset
Motif DE_12h DE_12h-NR1H2RXRA_MA0115.1 17 bp overlap
RAD21 4 datasets
ChIP H1 ENCFF698EWO 185 bp overlap
ChIP H1 ENCFF967OJF 182 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 162 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 148 bp overlap
RARA 1 dataset
Motif DE_12h DE_12h-RARA_MA0730.1 17 bp overlap
REST 1 dataset
Motif DE_12h DE_12h-REST_MA0138.3 20 bp overlap
Rarb 1 dataset
Motif DE_12h DE_12h-Rarb_MA0858.1 17 bp overlap
Rhox11 3 datasets
Motif DE_12h DE_12h-Rhox11_MA0629.2 9 bp overlap
Motif DE_36h DE_36h-Rhox11_MA0629.2 9 bp overlap
Motif ES_0h ES_0h-Rhox11_MA0629.2 9 bp overlap
SREBF2 1 dataset
Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap
TCF7L2 1 dataset
Motif DE_12h DE_12h-TCF7L2_MA0523.2 9 bp overlap
USP7 1 dataset
ChIP HEK293T GSE61048.USP7.HEK293T 145 bp overlap
ZNF76 1 dataset
Motif DE_12h DE_12h-ZNF76_MA1716.2 17 bp overlap
ZNF766 1 dataset
Motif DE_12h DE_12h-ZNF766_MA2098.1 9 bp overlap
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