chrX : 15,665,076 15,665,309
233 bp 20 TFs 2 linked genes
This 233 bp open chromatin element is linked to CA5BP1 and CLTRN and is bound by 20 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CA5BP1 9.7 kb Proximal Proximity
CLTRN 9.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chrX:15,660,076 – 15,670,309
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP HCC1806_NTsiRNA GSE116879.BRD2.HCC1806_NTsiRNA 93 bp overlap
Cebpa 2 datasets
ChIP BLaER1 ENCFF031ISE 169 bp overlap
ChIP BLaER1 ENCFF262VBH 194 bp overlap
FOXA1 3 datasets
ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 73 bp overlap
ChIP PDAC GSE64557.FOXA1.PDAC 195 bp overlap
ChIP PDAC_SHCTR GSE64557.FOXA1.PDAC_SHCTR 233 bp overlap
FOXA2 4 datasets
ChIP CFPAC-1_EV GSE119930.FOXA2.CFPAC-1_EV 142 bp overlap
ChIP CFPAC-1_HOXB8-OE GSE119930.FOXA2.CFPAC-1_HOXB8-OE 113 bp overlap
ChIP DE DE-FOXA2-1 233 bp overlap
ChIP DE DE-FOXA2-2 233 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-2 233 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 199 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 233 bp overlap
ChIP DE DE-GATA6-2 233 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 185 bp overlap
ChIP foregut GSE117136.GATA6.foregut 233 bp overlap
HIF1A 2 datasets
ChIP PC-3_hypoxia_siCtrl GSE106305.HIF1A.PC-3_hypoxia_siCtrl 99 bp overlap
ChIP PC-3_siOC2 GSE106305.HIF1A.PC-3_siOC2 113 bp overlap
HNF1B 1 dataset
ChIP PDAC GSE64557.HNF1B.PDAC 179 bp overlap
IRF1 1 dataset
ChIP PDAC GSE64557.IRF1.PDAC 112 bp overlap
MAX 1 dataset
ChIP A549 ENCFF310XGQ 233 bp overlap
RELA 1 dataset
ChIP FaDu_LPS GSE132018.RELA.FaDu_LPS 110 bp overlap
RNF2 1 dataset
ChIP K-562 ENCSR820GND.RNF2.K-562 105 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 165 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 233 bp overlap
SMAD3 2 datasets
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 115 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 176 bp overlap
STAT3 3 datasets
ChIP FaDu_DMSO GSE78212.STAT3.FaDu_DMSO 103 bp overlap
ChIP MCF-10A ENCSR000DOQ.STAT3.MCF-10A 75 bp overlap
ChIP MCF10A-Er-Src_TAM GSE115597.STAT3.MCF10A-Er-Src_TAM 76 bp overlap
USF1 2 datasets
ChIP H1 ENCFF090WVU 183 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 148 bp overlap
YY1 2 datasets
ChIP liver ENCFF515BWJ 57 bp overlap
ChIP liver ENCFF515BWJ 233 bp overlap
ZNF652 1 dataset
ChIP HepG2 ENCFF331VPZ 233 bp overlap