chr20 : 56,632,796 56,633,063
267 bp 12 TFs 2 linked genes
This 267 bp open chromatin element is linked to TFAP2C and ENSG00000289199 and is bound by 12 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
TFAP2C 3.5 kb Proximal Proximity
ENSG00000289199 7.7 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:56,627,796 – 56,638,063
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP SK-MEL-147 GSE94488.BRD2.SK-MEL-147 104 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 147 bp overlap
EZH2 1 dataset
ChIP SF8628 GSE94834.EZH2.SF8628 267 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 267 bp overlap
ChIP DE DE-GATA4-2 267 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 267 bp overlap
ChIP DE DE-GATA6-2 267 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 267 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 267 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 267 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 267 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 224 bp overlap
MEN1 1 dataset
ChIP MCF-7_E2 GSE85317.MEN1.MCF-7_E2 105 bp overlap
POLR2A 1 dataset
ChIP MCF-7 ENCFF164XWP 77 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 267 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 267 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 267 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 267 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 267 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 267 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 267 bp overlap
SUZ12 1 dataset
ChIP Aska-SS GSE108025.SUZ12.Aska-SS 161 bp overlap