chr20 : 13,822,575 – 13,822,767
192 bp 18 TFs 0 linked genes
This 192 bp open chromatin element has no linked target genes and is bound by 18 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr20:13,817,575 – 13,827,767
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
18 transcription factors
Source
Cell type
CTCF 115 datasets
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 192 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 192 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 192 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 169 bp overlap
ChIP A-549 ENCSR000DNA.CTCF.A-549 142 bp overlap
ChIP AG04449 ENCFF248MBD 175 bp overlap
ChIP AG10803 ENCFF549AQK 174 bp overlap
ChIP BE2C ENCFF757SRF 192 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 156 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 138 bp overlap
ChIP DND-41 ENCFF913MRA 192 bp overlap
ChIP DND41 ENCSR000AQU.CTCF.DND41 136 bp overlap
ChIP GM23338 ENCFF531QOI 192 bp overlap
ChIP GM23338 ENCFF772DML 139 bp overlap
ChIP H1 ENCFF414GZI 182 bp overlap
ChIP H1 ENCFF764RHO 192 bp overlap
ChIP H9 ENCFF152GTF 192 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 165 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 192 bp overlap
ChIP HCT116 ENCFF209YMI 192 bp overlap
ChIP HFFc6 ENCFF005CJI 192 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 192 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 192 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 104 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 145 bp overlap
ChIP Hep-G2 ERP000209.CTCF.Hep-G2 148 bp overlap
ChIP HepG2 ENCFF668CTD 143 bp overlap
ChIP HepG2 ENCFF757EKU 192 bp overlap
ChIP K-562 ENCSR000BPJ.CTCF.K-562 113 bp overlap
ChIP K-562 ENCSR000DMA.CTCF.K-562 156 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 192 bp overlap
ChIP K562 ENCFF082GOI 141 bp overlap
ChIP MCF-7 ENCFF139NQI 192 bp overlap
ChIP MCF-7 ENCFF162GNE 184 bp overlap
ChIP MCF-7 ENCFF198DQX 175 bp overlap
ChIP MCF-7 ENCFF210JUZ 192 bp overlap
ChIP MCF-7 ENCFF414SZG 173 bp overlap
ChIP MCF-7 ENCFF494VXA 175 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 182 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 192 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 170 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 192 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 144 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 166 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 91 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 109 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 192 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 192 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 192 bp overlap
ChIP MCF-7_E2 ERP000380.CTCF.MCF-7_E2 124 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 104 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 165 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 131 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 159 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 178 bp overlap
ChIP PANC-1 ENCSR203QEB.CTCF.PANC-1 192 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 192 bp overlap
ChIP Panc1 ENCFF056JQX 182 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 181 bp overlap
ChIP RWPE2 ENCFF911IEE 192 bp overlap
ChIP RWPE2 ENCFF911IEE 192 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 123 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 154 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 189 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 113 bp overlap
ChIP VCaP ENCFF858YQT 192 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 192 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 124 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 178 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 139 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 119 bp overlap
ChIP adrenal-gland ENCSR450BLH.CTCF.adrenal-gland 183 bp overlap
ChIP ascending aorta ENCFF451CCT 192 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 170 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 192 bp overlap
ChIP chondrocyte ENCFF134ORZ 192 bp overlap
ChIP choroid plexus epithelial cell ENCFF407YNR 192 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 122 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 166 bp overlap
ChIP endodermal cell ENCFF471YCZ 188 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 147 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 171 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 112 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DUH.CTCF.fibroblast_FORESKIN 160 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 126 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 108 bp overlap
ChIP fibroblast_SKIN_ABDOMEN ENCSR000DPV.CTCF.fibroblast_SKIN_ABDOMEN 110 bp overlap
ChIP fibroblast_SKIN_LEG ENCSR000DPG.CTCF.fibroblast_SKIN_LEG 103 bp overlap
ChIP foreskin fibroblast ENCFF671HLG 116 bp overlap
ChIP hESC GSE20650.CTCF.hESC 103 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 192 bp overlap
ChIP heart left ventricle ENCFF987PUT 192 bp overlap
ChIP heart right ventricle ENCFF027ORH 192 bp overlap
ChIP heart_left-ventricle ENCSR791AYW.CTCF.heart_left-ventricle 192 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 89 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 124 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 173 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 144 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 152 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 113 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 168 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 138 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 186 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 161 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 180 bp overlap
ChIP islet ERP004003.CTCF.islet 161 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 141 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 192 bp overlap
ChIP myotube ENCSR000ANS.CTCF.myotube 192 bp overlap
ChIP neural progenitor cell ENCFF420RBO 192 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 192 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 138 bp overlap
ChIP pancreas ENCSR000DND.CTCF.pancreas 93 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 152 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 192 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF364PUR 65 bp overlap
ESR1 5 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 128 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 128 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 138 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 137 bp overlap
ChIP U2OS_10nM-E2-B GSE151039.ESR1.U2OS_10nM-E2-B 139 bp overlap
FLYWCH1 1 dataset
ChIP HepG2 ENCFF253QCC 109 bp overlap
IFNA1 2 datasets
ChIP Huh-7_GFP GSE110511.IFNA1.Huh-7_GFP 192 bp overlap
ChIP Huh-7_NS5 GSE110511.IFNA1.Huh-7_NS5 192 bp overlap
JUND 1 dataset
ChIP Hep-G2 ENCSR000BGK.JUND.Hep-G2 139 bp overlap
MED1 1 dataset
ChIP hMSC-TERT4_osteoblast-D3 GSE113253.MED1.hMSC-TERT4_osteoblast-D3 110 bp overlap
PAF1 1 dataset
ChIP HCT-116_ab20662 GSE97527.PAF1.HCT-116_ab20662 125 bp overlap
PAX6 1 dataset
ChIP retina_pigment GSE60024.PAX6.retina_pigment 192 bp overlap
RAD21 24 datasets
ChIP H1 ENCFF698EWO 123 bp overlap
ChIP H1 ENCFF967OJF 192 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 161 bp overlap
ChIP HepG2 ENCFF906QIS 180 bp overlap
ChIP MCF-7 ENCFF694KOM 192 bp overlap
ChIP MCF-7 ENCFF724VCQ 192 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 161 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 131 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 189 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 118 bp overlap
ChIP MDM_IFNb GSE103477.RAD21.MDM_IFNb 91 bp overlap
ChIP RH4 GSE83726.RAD21.RH4 191 bp overlap
ChIP THP-1_PMA_IFNb-6h GSE103477.RAD21.THP-1_PMA_IFNb-6h 173 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 126 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 160 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 109 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 192 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 176 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 151 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 138 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 146 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 184 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 151 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 182 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 161 bp overlap
SMC3 1 dataset
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 164 bp overlap
STAG1 5 datasets
ChIP HeLa GSE126990.STAG1.HeLa 158 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 158 bp overlap
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 134 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 140 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 109 bp overlap
SUPT5H 2 datasets
ChIP HeLa GSE125534.SUPT5H.HeLa 192 bp overlap
ChIP HeLa_DOX GSE125534.SUPT5H.HeLa_DOX 105 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 132 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 126 bp overlap
ZFP64 1 dataset
ChIP Hep-G2 ENCSR487CPI.ZFP64.Hep-G2 127 bp overlap
ZNF441 1 dataset
ChIP HepG2 ENCFF738UDK 192 bp overlap
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