Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

32 transcription factors

ARNT::HIF1A 2 datasets

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap

CBX1 1 dataset

ChIP DKO GSE135580.CBX1.DKO 231 bp overlap

CRX 2 datasets

ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 269 bp overlap

ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 232 bp overlap

CTCF 5 datasets

ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 135 bp overlap

ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 123 bp overlap

ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 192 bp overlap

ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 286 bp overlap

ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 294 bp overlap

DUX4 4 datasets

Motif DE_36h DE_36h-DUX4_MA0468.1 11 bp overlap

Motif DE_48h DE_48h-DUX4_MA0468.1 11 bp overlap

ChIP WA01 GSE94322.DUX4.WA01 337 bp overlap

DUXA 2 datasets

Motif DE_36h DE_36h-DUXA_MA0884.2 13 bp overlap

Motif DE_48h DE_48h-DUXA_MA0884.2 13 bp overlap

Dux 2 datasets

Motif DE_36h DE_36h-Dux_MA0611.3 11 bp overlap

Motif DE_48h DE_48h-Dux_MA0611.3 11 bp overlap

E2F6 2 datasets

Motif DE_36h DE_36h-E2F6_MA0471.3 8 bp overlap

Motif DE_48h DE_48h-E2F6_MA0471.3 8 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 204 bp overlap

ERF::HOXB13 2 datasets

Motif DE_36h DE_36h-ERFHOXB13_MA1937.2 13 bp overlap

Motif DE_48h DE_48h-ERFHOXB13_MA1937.2 13 bp overlap

ETV2::DRGX 2 datasets

Motif DE_36h DE_36h-ETV2DRGX_MA1940.2 12 bp overlap

Motif DE_48h DE_48h-ETV2DRGX_MA1940.2 12 bp overlap

ETV5::DRGX 2 datasets

Motif DE_36h DE_36h-ETV5DRGX_MA1944.2 12 bp overlap

Motif DE_48h DE_48h-ETV5DRGX_MA1944.2 12 bp overlap

ETV5::HOXA2 2 datasets

Motif DE_36h DE_36h-ETV5HOXA2_MA1948.2 12 bp overlap

Motif DE_48h DE_48h-ETV5HOXA2_MA1948.2 12 bp overlap

EWSR1-FLI1 2 datasets

Motif DE_36h DE_36h-EWSR1-FLI1_MA0149.1 18 bp overlap

Motif DE_48h DE_48h-EWSR1-FLI1_MA0149.1 18 bp overlap

GATA4 3 datasets

ChIP DE DE-GATA4-1 315 bp overlap

ChIP DE DE-GATA4-2 328 bp overlap

ChIP foregut GSE117136.GATA4.foregut 304 bp overlap

GATA6 7 datasets

ChIP DE DE-GATA6-1 333 bp overlap

ChIP DE DE-GATA6-2 347 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 295 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 327 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 293 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 295 bp overlap

ChIP foregut GSE117136.GATA6.foregut 282 bp overlap

Gfi1B 1 dataset

Motif DE_36h DE_36h-Gfi1B_MA0483.2 10 bp overlap

HOXB2::ELK1 2 datasets

Motif DE_36h DE_36h-HOXB2ELK1_MA1957.1 14 bp overlap

Motif DE_48h DE_48h-HOXB2ELK1_MA1957.1 14 bp overlap

MEF2D 1 dataset

ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 211 bp overlap

NEUROD1 1 dataset

ChIP D283-Med GSE92582.NEUROD1.D283-Med 219 bp overlap

OTX2 1 dataset

ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 234 bp overlap

PHOX2A 2 datasets

Motif DE_36h DE_36h-PHOX2A_MA0713.1 11 bp overlap

Motif DE_48h DE_48h-PHOX2A_MA0713.1 11 bp overlap

PHOX2B 2 datasets

Motif DE_36h DE_36h-PHOX2B_MA0681.3 12 bp overlap

Motif DE_48h DE_48h-PHOX2B_MA0681.3 12 bp overlap

PROP1 2 datasets

Motif DE_36h DE_36h-PROP1_MA0715.1 11 bp overlap

Motif DE_48h DE_48h-PROP1_MA0715.1 11 bp overlap

RORB 1 dataset

ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 217 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 234 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 241 bp overlap

SP5 2 datasets

Motif DE_36h DE_36h-SP5_MA1965.2 6 bp overlap

Motif DE_48h DE_48h-SP5_MA1965.2 6 bp overlap

SPIB 2 datasets

Motif DE_36h DE_36h-SPIB_MA0081.3 13 bp overlap

Motif DE_48h DE_48h-SPIB_MA0081.3 13 bp overlap

T 1 dataset

ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 179 bp overlap

XBP1 2 datasets

Motif DE_36h DE_36h-XBP1_MA0844.2 11 bp overlap

Motif DE_48h DE_48h-XBP1_MA0844.2 11 bp overlap

ZKSCAN5 2 datasets

Motif DE_36h DE_36h-ZKSCAN5_MA1652.2 9 bp overlap

Motif DE_48h DE_48h-ZKSCAN5_MA1652.2 9 bp overlap

Genome Browser