DE-4

DE-4.2

Submodule 57 genes

Cytoskeletal and stress response signaling

This 57-gene module includes FOXO3, LMNA, WWTR1, MAP2K1, and CTNND1, with enrichment in cytoskeletal organization, stress response, and signaling pathways. Knockdown of FOXH1, SOX17, and TAF10 activates this module. Knockdown of ARID1A, ZNF431, and TCEB3 represses this module.


TF Regulatory Network

Direction indicates the effect of TF knockdown on this submodule (↑ = KD upregulates; ↓ = KD downregulates).

Evidence: Direction: Max binding-only shown:
Perturbation + Binding
Perturbation only
Binding only
TF Dir NES #gRNA padj Bind OR

Enriched Terms

GO terms and pathway annotations enriched in this gene set (g:Profiler).


Module Genes (54)

All genes assigned to this co-expression submodule.

Gene Type Publications

Local co-expression graph for member genes built from Hotspot z-scores. Adjust the z-score threshold and repulsion sliders to explore the neighbourhood.

Gene Co-expression Network

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Low
High z