chr17 : 57,568,350 57,568,969
619 bp 29 TFs 1 linked gene
This 619 bp open chromatin element is linked to MRPS23 and is bound by 29 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
MRPS23 281.3 kb Distal Multiome
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr17:57,563,350 – 57,573,969
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 153 bp overlap
CTCFL 1 dataset
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 145 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 270 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 475 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 541 bp overlap
ChIP DE DE-FOXA2-2 562 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 603 bp overlap
ChIP DE DE-GATA4-2 619 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 592 bp overlap
ChIP DE DE-GATA6-2 619 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 567 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 619 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 554 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 587 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 619 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 580 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 585 bp overlap
GLIS1 2 datasets
ChIP HEK293 ENCFF299RSE 275 bp overlap
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 467 bp overlap
HSF1 3 datasets
ChIP MCF-7_hyperthermia-15min GSE137558.HSF1.MCF-7_hyperthermia-15min 460 bp overlap
ChIP MO91 GSE45852.HSF1.MO91 237 bp overlap
ChIP WA09_heat-shock GSE105028.HSF1.WA09_heat-shock 225 bp overlap
INSM2 1 dataset
ChIP HEK293 ENCSR382GSF.INSM2.HEK293 206 bp overlap
JUN 6 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 555 bp overlap
ChIP DE_D1 S13-DE-d1-JUN-exp1 523 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 577 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 580 bp overlap
ChIP DE_D2 S54-DE-d2-JUN-exp2 289 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 589 bp overlap
MZF1 1 dataset
ChIP HEK293 ENCSR298QUH.MZF1.HEK293 389 bp overlap
NEUROD1 3 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 275 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 283 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 211 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 560 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 615 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 476 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 520 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 616 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 373 bp overlap
SMARCA4 2 datasets
ChIP SYO-1 GSE108025.SMARCA4.SYO-1 619 bp overlap
ChIP hiPSC GSE124903.SMARCA4.hiPSC 173 bp overlap
SMARCC1 6 datasets
ChIP Aska-SS GSE108025.SMARCC1.Aska-SS 619 bp overlap
ChIP DE_D1 S15-DE-d1-BAF155-exp1 397 bp overlap
ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 619 bp overlap
ChIP SYO-1_shCt GSE139053.SMARCC1.SYO-1_shCt 436 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 280 bp overlap
ChIP SYO-1_shRING1A-B GSE139053.SMARCC1.SYO-1_shRING1A-B 57 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 258 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 564 bp overlap
SS18 1 dataset
ChIP SYO-1_shRING1A-B GSE139053.SS18.SYO-1_shRING1A-B 333 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 242 bp overlap
TSHZ2 1 dataset
ChIP SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour ENCSR282NLQ.TSHZ2.SK-N-SH_all-trans-retinoic-acid_6-uM_48-hour 78 bp overlap
TWIST1 2 datasets
ChIP BE2C GSE80151.TWIST1.BE2C 118 bp overlap
ChIP SK-N-BE2-C GSE80151.TWIST1.SK-N-BE2-C 118 bp overlap
ZBTB12 2 datasets
ChIP HEK293 ENCFF963HPT 331 bp overlap
ChIP HEK293 ENCSR543KOA.ZBTB12.HEK293 227 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 609 bp overlap
ZIC2 1 dataset
ChIP HEK293 ENCFF033NQQ 242 bp overlap
ZIC5 1 dataset
ChIP HCT-116_sc2 GSE127960.ZIC5.HCT-116_sc2 198 bp overlap
ZNF18 1 dataset
ChIP HEK293 ENCSR977HTH.ZNF18.HEK293 285 bp overlap