chr1 : 245,611,326 245,611,920
594 bp 29 TFs 0 linked genes
This 594 bp open chromatin element has no linked target genes and is bound by 29 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:245,606,326 – 245,616,920
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
29 transcription factors
Source
Cell type
BRD2 1 dataset
ChIP THP-1_iBET-BD2 GSE138084.BRD2.THP-1_iBET-BD2 292 bp overlap
BRD4 2 datasets
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 171 bp overlap
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 263 bp overlap
Cebpa 1 dataset
ChIP BLaER1 ENCFF031ISE 258 bp overlap
E2F6 5 datasets
ChIP K-562 ENCSR000BLI.E2F6.K-562 150 bp overlap
ChIP K-562 ENCSR000EWJ.E2F6.K-562 182 bp overlap
ChIP K-562 ENCSR000BLI.E2F6.K-562 96 bp overlap
ChIP K562 ENCFF136LTS 317 bp overlap
ChIP WA01 ENCSR000BSI.E2F6.WA01 150 bp overlap
ESR1 2 datasets
ChIP Ishikawa_siETV4-72h GSE129803.ESR1.Ishikawa_siETV4-72h 162 bp overlap
ChIP Ishikawa_siNTC-96h GSE129803.ESR1.Ishikawa_siNTC-96h 194 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 253 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 352 bp overlap
ChIP DE DE-FOXA2-2 360 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 231 bp overlap
GATA1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 184 bp overlap
GATA2 1 dataset
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 180 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 372 bp overlap
ChIP DE DE-GATA4-2 509 bp overlap
ChIP foregut GSE117136.GATA4.foregut 392 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 414 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 425 bp overlap
GATA6 13 datasets
ChIP DE DE-GATA6-1 459 bp overlap
ChIP DE DE-GATA6-2 479 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 280 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 296 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 300 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 395 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 383 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
ChIP foregut GSE117136.GATA6.foregut 408 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 368 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 473 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 430 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 364 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 329 bp overlap
IRF1 1 dataset
ChIP K-562_EPZ GSE129380.IRF1.K-562_EPZ 178 bp overlap
KDM1A 2 datasets
ChIP pancreatic-progenitor_GT GSE104840.KDM1A.pancreatic-progenitor_GT 327 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 265 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 346 bp overlap
PLAG1 1 dataset
ChIP K-562 GSE111469.PLAG1.K-562 183 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 438 bp overlap
SMAD4 1 dataset
ChIP Caco-2 GSE112946.SMAD4.Caco-2 134 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 154 bp overlap
STAG1 1 dataset
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 122 bp overlap
TAL1 1 dataset
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 142 bp overlap
TARDBP 2 datasets
ChIP K-562 ENCSR429XTR.TARDBP.K-562 73 bp overlap
ChIP K-562 GSE120104.TARDBP.K-562 60 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 174 bp overlap
TFAP2B 1 dataset
ChIP SK-N-SH ENCFF869XXQ 311 bp overlap
ZNF865 1 dataset
ChIP HepG2 ENCFF472KAQ 106 bp overlap
ZSCAN4 1 dataset
ChIP HEK293 ENCFF381BKT 66 bp overlap