chr15 : 49,733,753 49,734,343
590 bp 22 TFs 0 linked genes
This 590 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr15:49,728,753 – 49,739,343
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
AHR 1 dataset
ChIP MCF-7_TCDD_45min GSE90550.AHR.MCF-7_TCDD_45min 133 bp overlap
BAF155 1 dataset
ChIP VCaP_shERG GSE110655.BAF155.VCaP_shERG 142 bp overlap
CTBP1 2 datasets
ChIP MCF-7 ENCFF969VBY 374 bp overlap
ChIP MCF-7 ENCFF969VBY 149 bp overlap
CUX1 2 datasets
ChIP MCF-7 ENCFF779ATB 412 bp overlap
ChIP MCF-7 ENCFF779ATB 209 bp overlap
DPF2 1 dataset
ChIP MCF-7 ENCFF712EXQ 401 bp overlap
ESR1 4 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 220 bp overlap
ChIP MCF-7_SIGATA_E2 GSE40129.ESR1.MCF-7_SIGATA_E2 145 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 220 bp overlap
ChIP MDA-MB-134-VI_E2 GSE109103.ESR1.MDA-MB-134-VI_E2 189 bp overlap
FOXA1 21 datasets
ChIP 22Rv1_CST GSE123618.FOXA1.22Rv1_CST 170 bp overlap
ChIP 22Rv1_CST_Crispr_WT3 GSE123618.FOXA1.22Rv1_CST_Crispr_WT3 189 bp overlap
ChIP LNCaP-C4-2B_CST GSE123618.FOXA1.LNCaP-C4-2B_CST 165 bp overlap
ChIP LNCaP-C4-2B_TFS GSE123618.FOXA1.LNCaP-C4-2B_TFS 139 bp overlap
ChIP LNCaP-abl GSE63034.FOXA1.LNCaP-abl 130 bp overlap
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 237 bp overlap
ChIP LNCaP_G87R_shFOXA1 GSE128883.FOXA1.LNCaP_G87R_shFOXA1 175 bp overlap
ChIP LNCaP_SHFOXA1_R1881 GSE37345.FOXA1.LNCaP_SHFOXA1_R1881 161 bp overlap
ChIP LNCaP_TFS GSE123618.FOXA1.LNCaP_TFS 184 bp overlap
ChIP LS180 GSE140533.FOXA1.LS180 102 bp overlap
ChIP MCF-7 ENCFF465LTH 292 bp overlap
ChIP MCF-7 GSE72249.FOXA1.MCF-7 197 bp overlap
ChIP MCF-7 ERP001226.FOXA1.MCF-7 166 bp overlap
ChIP MCF-7 ERP000380.FOXA1.MCF-7 160 bp overlap
ChIP MCF-7-TAMR-1_4OH-Tam GSE75201.FOXA1.MCF-7-TAMR-1_4OH-Tam 108 bp overlap
ChIP MCF-7_E2 GSE23852.FOXA1.MCF-7_E2 173 bp overlap
ChIP MCF-7_E2 GSE72249.FOXA1.MCF-7_E2 161 bp overlap
ChIP MCF-7_E2_TAM ERP000380.FOXA1.MCF-7_E2_TAM 164 bp overlap
ChIP MCF-7_ETOH GSE23852.FOXA1.MCF-7_ETOH 179 bp overlap
ChIP MCF-7_TAMR_E2_TAM ERP000380.FOXA1.MCF-7_TAMR_E2_TAM 202 bp overlap
ChIP prostate-cancer_PDX_189-3 GSE130408.FOXA1.prostate-cancer_PDX_189-3 134 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 403 bp overlap
ChIP DE DE-FOXA2-2 382 bp overlap
GATA3 1 dataset
ChIP MCF-7 ENCFF437NQS 280 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 585 bp overlap
ChIP DE DE-GATA4-2 590 bp overlap
GATA6 8 datasets
ChIP DE DE-GATA6-1 528 bp overlap
ChIP DE DE-GATA6-2 590 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 521 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 568 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 523 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 478 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 529 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 504 bp overlap
NFIB 2 datasets
ChIP MCF-7 ENCFF799WGQ 350 bp overlap
ChIP MCF-7 ENCFF925CGH 371 bp overlap
NR2F2 2 datasets
ChIP MCF-7 ENCFF329FZB 275 bp overlap
ChIP MCF-7 ENCSR000BUY.NR2F2.MCF-7 123 bp overlap
POLR2A 1 dataset
ChIP body of pancreas ENCFF727UBE 302 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 140 bp overlap
PPARG 4 datasets
ChIP HT29_ROSIG_2H GSE77039.PPARG.HT29_ROSIG_2H 187 bp overlap
ChIP HT29_ROSIG_48H GSE77039.PPARG.HT29_ROSIG_48H 164 bp overlap
ChIP Hep-G2 ENCSR130VQL.PPARG.Hep-G2 130 bp overlap
ChIP HepG2 ENCFF329FBJ 244 bp overlap
RAD21 1 dataset
ChIP liver ENCFF522JHE 248 bp overlap
RXR 1 dataset
ChIP LS180 GSE31939.RXR.LS180 151 bp overlap
RXRA 2 datasets
ChIP liver ENCFF077DAP 88 bp overlap
ChIP liver ENCFF807CIA 230 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 108 bp overlap
SP1 2 datasets
ChIP liver ENCFF597LFJ 297 bp overlap
ChIP liver ENCFF769YSM 100 bp overlap
TFAP2C 2 datasets
ChIP MCF-7_E2 GSE23852.TFAP2C.MCF-7_E2 200 bp overlap
ChIP MCF-7_ETOH GSE23852.TFAP2C.MCF-7_ETOH 165 bp overlap