Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

25 transcription factors

CDX1 2 datasets

Motif DE_60h DE_60h-CDX1_MA0878.3 10 bp overlap

Motif DE_72h DE_72h-CDX1_MA0878.3 10 bp overlap

CDX2 2 datasets

Motif DE_60h DE_60h-CDX2_MA0465.3 8 bp overlap

Motif DE_72h DE_72h-CDX2_MA0465.3 8 bp overlap

CDX4 2 datasets

Motif DE_60h DE_60h-CDX4_MA1473.2 9 bp overlap

Motif DE_72h DE_72h-CDX4_MA1473.2 9 bp overlap

CTCF 2 datasets

Motif DE_60h DE_60h-CTCF_MA1930.2 33 bp overlap

Motif DE_72h DE_72h-CTCF_MA1930.2 33 bp overlap

DPRX 2 datasets

Motif DE_60h DE_60h-DPRX_MA1480.2 9 bp overlap

Motif DE_72h DE_72h-DPRX_MA1480.2 9 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 448 bp overlap

EZH2 1 dataset

ChIP A-1847_CARM1-KO GSE95643.EZH2.A-1847_CARM1-KO 67 bp overlap

FOXA2 2 datasets

ChIP DE DE-FOXA2-1 392 bp overlap

ChIP DE DE-FOXA2-2 375 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 450 bp overlap

ChIP DE DE-GATA4-2 450 bp overlap

ChIP Hep-G2 GSE135714.GATA4.Hep-G2 450 bp overlap

ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 350 bp overlap

GATA6 9 datasets

ChIP DE DE-GATA6-1 450 bp overlap

ChIP DE DE-GATA6-2 450 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 450 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 450 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 450 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 450 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 450 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 450 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 450 bp overlap

HOXA10 2 datasets

Motif DE_60h DE_60h-HOXA10_MA0899.2 9 bp overlap

Motif DE_72h DE_72h-HOXA10_MA0899.2 9 bp overlap

HOXD9 2 datasets

Motif DE_60h DE_60h-HOXD9_MA0913.3 9 bp overlap

Motif DE_72h DE_72h-HOXD9_MA0913.3 9 bp overlap

JUN 1 dataset

ChIP DE_D2 S02-DE-d2-JUN-exp1 298 bp overlap

KLF5 1 dataset

ChIP HEK293_D418N GSE88976.KLF5.HEK293_D418N 246 bp overlap

MEIS1 1 dataset

ChIP CHRF28811 ERR063469.MEIS1.CHRF28811 213 bp overlap

MEIS2 2 datasets

Motif DE_60h DE_60h-MEIS2_MA1640.2 9 bp overlap

Motif DE_72h DE_72h-MEIS2_MA1640.2 9 bp overlap

Nr2e3 2 datasets

Motif DE_60h DE_60h-Nr2e3_MA0164.2 6 bp overlap

Motif DE_72h DE_72h-Nr2e3_MA0164.2 6 bp overlap

RUNX2 1 dataset

ChIP LNCaP-C4-2B GSE33889.RUNX2.LNCaP-C4-2B 218 bp overlap

Rhox11 2 datasets

Motif DE_60h DE_60h-Rhox11_MA0629.2 9 bp overlap

Motif DE_72h DE_72h-Rhox11_MA0629.2 9 bp overlap

SMAD2-3 2 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 339 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 269 bp overlap

SMAD2_3 1 dataset

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 407 bp overlap

THRA 1 dataset

Motif DE_60h DE_60h-THRA_MA1969.2 18 bp overlap

ZBTB6 2 datasets

Motif DE_60h DE_60h-ZBTB6_MA1581.2 9 bp overlap

Motif DE_72h DE_72h-ZBTB6_MA1581.2 9 bp overlap

ZNF331 2 datasets

Motif DE_60h DE_60h-ZNF331_MA1726.2 10 bp overlap

Motif DE_72h DE_72h-ZNF331_MA1726.2 10 bp overlap

ZNF816 2 datasets

Motif DE_60h DE_60h-ZNF816_MA1719.2 15 bp overlap

Motif DE_72h DE_72h-ZNF816_MA1719.2 15 bp overlap

Genome Browser