chr14 : 47,679,084 – 47,679,242
158 bp 13 TFs 1 linked gene
This 158 bp open chromatin element is linked to MDGA2 and is bound by 13 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MDGA2 3.5 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr14:47,674,084 – 47,684,242
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
13 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 120 bp overlap
CTCF 187 datasets
ChIP 22Rv1 ENCFF466OXN 158 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 158 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 158 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 101 bp overlap
ChIP BE2C ENCFF757SRF 158 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 158 bp overlap
ChIP Caco-2 ENCFF934QYS 158 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 96 bp overlap
ChIP D54 ENCSR000DKN.CTCF.D54 141 bp overlap
ChIP D721Med ENCFF513FYD 158 bp overlap
ChIP DU145 GSE121021.CTCF.DU145 153 bp overlap
ChIP GM23338 ENCFF531QOI 158 bp overlap
ChIP GM23338 ENCFF772DML 152 bp overlap
ChIP H1 ENCFF230QSV 149 bp overlap
ChIP H1 ENCFF414GZI 158 bp overlap
ChIP H1 ENCFF764RHO 133 bp overlap
ChIP H9 ENCFF152GTF 158 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 158 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 158 bp overlap
ChIP HCT116 ENCFF209YMI 158 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 77 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 158 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 100 bp overlap
ChIP HUES-64 GSE97394.CTCF.HUES-64 158 bp overlap
ChIP HUES-64_DNMT-KO GSE97394.CTCF.HUES-64_DNMT-KO 158 bp overlap
ChIP Hep-G2 ENCSR000DUG.CTCF.Hep-G2 106 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 138 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 130 bp overlap
ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 92 bp overlap
ChIP HepG2 ENCFF194VBQ 158 bp overlap
ChIP HepG2 ENCFF668CTD 130 bp overlap
ChIP IMR-5 GSE78957.CTCF.IMR-5 91 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 118 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 137 bp overlap
ChIP K-562_5635 GSE131349.CTCF.K-562_5635 98 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 151 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 158 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 158 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 158 bp overlap
ChIP Kelly_shB4-res GSE115248.CTCF.Kelly_shB4-res 158 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 155 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 158 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 125 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 110 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 158 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 158 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 158 bp overlap
ChIP MCF-10A GSE98551.CTCF.MCF-10A 158 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 158 bp overlap
ChIP MCF-7 ENCFF162GNE 158 bp overlap
ChIP MCF-7 ENCFF198DQX 158 bp overlap
ChIP MCF-7 ENCFF210JUZ 158 bp overlap
ChIP MCF-7 ENCFF414SZG 158 bp overlap
ChIP MCF-7 ENCFF494VXA 158 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 158 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 147 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 131 bp overlap
ChIP MCF-7 GSE70764.CTCF.MCF-7 136 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 129 bp overlap
ChIP MCF-7L_TAMR GSE108787.CTCF.MCF-7L_TAMR 158 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 158 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 158 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 129 bp overlap
ChIP MCF-7L_t4 GSE108787.CTCF.MCF-7L_t4 158 bp overlap
ChIP MCF-7_HYPOXIA GSE78113.CTCF.MCF-7_HYPOXIA 158 bp overlap
ChIP MCF-7_NORMOXIA GSE78113.CTCF.MCF-7_NORMOXIA 158 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 158 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 158 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 158 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 158 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 158 bp overlap
ChIP PC-3 ENCFF487TUI 90 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 158 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 149 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 158 bp overlap
ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 158 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 158 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 158 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 158 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 158 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 144 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 158 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 157 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 158 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 133 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 144 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 147 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 158 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 158 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 112 bp overlap
ChIP U2OS_interphase GSE141081.CTCF.U2OS_interphase 158 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 158 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 134 bp overlap
ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 158 bp overlap
ChIP WERI-Rb-1 ENCFF349QKF 158 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 143 bp overlap
ChIP astrocyte ENCSR000AOO.CTCF.astrocyte 120 bp overlap
ChIP brain ENCFF067KUH 158 bp overlap
ChIP brain ENCFF099ASU 158 bp overlap
ChIP brain ENCFF163BBN 158 bp overlap
ChIP brain ENCFF685VRG 158 bp overlap
ChIP brain ENCFF685VRG 107 bp overlap
ChIP brain microvascular endothelial cell ENCFF526VHE 158 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 158 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 158 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 158 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 158 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 158 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF046GNG 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF087VBI 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF257LSY 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF311KBD 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF338KEP 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF403LNW 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF433UFM 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF457ZGY 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF476NBQ 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696JOF 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 158 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF974AQC 158 bp overlap
ChIP endodermal cell ENCFF471YCZ 158 bp overlap
ChIP endothelial cell ENCFF663LIE 158 bp overlap
ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 158 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 158 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 158 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 115 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 137 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 158 bp overlap
ChIP hESC_D15 GSE116862.CTCF.hESC_D15 158 bp overlap
ChIP hESC_D2 GSE116862.CTCF.hESC_D2 157 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 158 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 158 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 158 bp overlap
ChIP hESC_PRIMED GSE69646.CTCF.hESC_PRIMED 158 bp overlap
ChIP hepatocyte ENCFF263BLJ 96 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 158 bp overlap
ChIP hiPSC_Angelman GSE117283.CTCF.hiPSC_Angelman 158 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 158 bp overlap
ChIP hiPSC_HUES9 GSE106870.CTCF.hiPSC_HUES9 158 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 158 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 131 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 158 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 158 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 114 bp overlap
ChIP kidney epithelial cell ENCFF173LWY 158 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 141 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 144 bp overlap
ChIP nephron ENCFF589HXU 158 bp overlap
ChIP nephron ENCFF972IQB 158 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 158 bp overlap
ChIP neural cell ENCFF335ADI 158 bp overlap
ChIP neural crest cell ENCFF182LWK 158 bp overlap
ChIP neural progenitor cell ENCFF420RBO 158 bp overlap
ChIP neural progenitor cell ENCFF581WPG 158 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 158 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 158 bp overlap
ChIP osteocyte ENCFF929FPD 158 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 158 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 158 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 158 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 125 bp overlap
ChIP retina_AB1-FW16 GSE86981.CTCF.retina_AB1-FW16 158 bp overlap
ChIP retina_Hu22 GSE137311.CTCF.retina_Hu22 158 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 158 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 158 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 158 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 156 bp overlap
CTCFL 2 datasets
ChIP Kelly_resistant GSE103030.CTCFL.Kelly_resistant 108 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCFL.Kelly_shLUC-res 158 bp overlap
ESR1 1 dataset
ChIP MCF-7 GSE119057.ESR1.MCF-7 158 bp overlap
FOXP1 1 dataset
ChIP H9 GSE31006.FOXP1.H9 113 bp overlap
RAD21 27 datasets
ChIP H1 ENCFF698EWO 151 bp overlap
ChIP H1 ENCFF967OJF 138 bp overlap
ChIP HCT-116 ENCSR000BSB.RAD21.HCT-116 158 bp overlap
ChIP HCT116 ENCFF568PEO 158 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 83 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 85 bp overlap
ChIP Hep-G2 ENCSR054FKH.RAD21.Hep-G2 109 bp overlap
ChIP Hep-G2 ENCSR000EEG.RAD21.Hep-G2 113 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 132 bp overlap
ChIP Ishikawa ENCFF570JVV 158 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 139 bp overlap
ChIP MCF-7 ENCFF724VCQ 110 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 158 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 156 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 150 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 138 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 148 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 95 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 158 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 97 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 158 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 158 bp overlap
ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 129 bp overlap
ChIP hiPSC_IIA12 GSE106870.RAD21.hiPSC_IIA12 150 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 126 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 158 bp overlap
ChIP neural cell ENCFF564MOT 158 bp overlap
RELA 1 dataset
ChIP aortic-endothelial-cell_IL1B_D33 GSE139377.RELA.aortic-endothelial-cell_IL1B_D33 137 bp overlap
SMAD1 1 dataset
ChIP BG03 GSE36578.SMAD1.BG03 96 bp overlap
SMAD3 1 dataset
ChIP BG03 GSE36578.SMAD3.BG03 88 bp overlap
SMC3 1 dataset
ChIP neural ENCSR404BPV.SMC3.neural 158 bp overlap
STAG1 4 datasets
ChIP Hep-G2 ERP000209.STAG1.Hep-G2 142 bp overlap
ChIP Hep-G2 ENCSR167MTG.STAG1.Hep-G2 135 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 158 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 144 bp overlap
ZBTB2 1 dataset
ChIP Hep-G2 GSE97661.ZBTB2.Hep-G2 138 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 111 bp overlap
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