chr1 : 221,973,101 221,973,459
358 bp 14 TFs 1 linked gene
This 358 bp open chromatin element is linked to LINC02474 and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
LINC02474 6.8 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:221,968,101 – 221,978,459
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ATF2 6 datasets
ChIP GM12878 ENCSR961PPA.ATF2.GM12878 104 bp overlap
ChIP HEK293 ENCSR217HTK.ATF2.HEK293 90 bp overlap
ChIP Hep-G2 ENCSR047BUZ.ATF2.Hep-G2 101 bp overlap
ChIP HepG2 ENCFF955VER 137 bp overlap
ChIP K-562 ENCSR869IUD.ATF2.K-562 95 bp overlap
ChIP K562 ENCFF139ZZG 128 bp overlap
ATF3 2 datasets
ChIP K-562 ENCSR028UIU.ATF3.K-562 97 bp overlap
ChIP K562 ENCFF604FPV 116 bp overlap
ATF7 5 datasets
ChIP GM12878 ENCFF037PYH 177 bp overlap
ChIP GM12878 ENCSR014YCR.ATF7.GM12878 101 bp overlap
ChIP Hep-G2 ENCSR545FXC.ATF7.Hep-G2 93 bp overlap
ChIP HepG2 ENCFF470FKK 57 bp overlap
ChIP MCF-7 ENCSR866QPZ.ATF7.MCF-7 73 bp overlap
CREB1 3 datasets
ChIP Hep-G2 ENCSR112ALD.CREB1.Hep-G2 67 bp overlap
ChIP HepG2 ENCFF792THT 137 bp overlap
ChIP MCF-7 ENCFF867SAS 145 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 233 bp overlap
ChIP DE DE-FOXA2-2 314 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-2 358 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 233 bp overlap
ChIP DE DE-GATA6-2 333 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 210 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 303 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 289 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 112 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 139 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 129 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 254 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 271 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 119 bp overlap
JUND 1 dataset
ChIP HepG2 ENCFF869OPW 66 bp overlap
MAFK 1 dataset
Motif DE_12h DE_12h-MAFK_MA0496.4 10 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 106 bp overlap
SMAD2-3 2 datasets
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 194 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 160 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 192 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 215 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 285 bp overlap
ZNF16 1 dataset
Motif DE_12h DE_12h-ZNF16_MA1654.2 21 bp overlap