Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

22 transcription factors

ARNT::HIF1A 2 datasets

Motif DE_36h DE_36h-ARNTHIF1A_MA0259.2 5 bp overlap

Motif DE_48h DE_48h-ARNTHIF1A_MA0259.2 5 bp overlap

ATRX 1 dataset

ChIP metastatic-neuroblastoma_SKNFI GSE100148.ATRX.metastatic-neuroblastoma_SKNFI 618 bp overlap

DUX4 1 dataset

ChIP WA01 GSE94322.DUX4.WA01 288 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 190 bp overlap

FOXA2 2 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.FOXA2.BJ1-hTERT_FOXA2_GATA4_Coexp 376 bp overlap

ChIP DE DE-FOXA2-1 302 bp overlap

GATA1 1 dataset

ChIP K-562 GSE107726.GATA1.K-562 274 bp overlap

GATA3 6 datasets

ChIP MCF-7 ENCFF352QVM 477 bp overlap

ChIP MCF-7 GSE133072.GATA3.MCF-7 368 bp overlap

ChIP MCF-7 GSE122847.GATA3.MCF-7 328 bp overlap

ChIP MCF-7_E2 GSE40129.GATA3.MCF-7_E2 120 bp overlap

ChIP MCF-7_sgScr GSE133072.GATA3.MCF-7_sgScr 169 bp overlap

ChIP T-47D GSE51274.GATA3.T-47D 308 bp overlap

GATA4 6 datasets

ChIP BJ1-hTERT_FOXA2_GATA4_Coexp GSE92491.GATA4.BJ1-hTERT_FOXA2_GATA4_Coexp 186 bp overlap

ChIP DE DE-GATA4-1 463 bp overlap

ChIP DE DE-GATA4-2 551 bp overlap

ChIP YCC-3 GSE51705.GATA4.YCC-3 211 bp overlap

ChIP cardiomyocyte_5 GSE85628.GATA4.cardiomyocyte_5 606 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 292 bp overlap

GATA5 2 datasets

Motif DE_36h DE_36h-GATA5_MA0766.3 8 bp overlap

Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 413 bp overlap

ChIP DE DE-GATA6-2 489 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 561 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 609 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 592 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 480 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 618 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 618 bp overlap

ChIP YCC-3 GSE51705.GATA6.YCC-3 303 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 401 bp overlap

ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 258 bp overlap

MGA::EVX1 2 datasets

Motif DE_36h DE_36h-MGAEVX1_MA1960.2 11 bp overlap

Motif DE_48h DE_48h-MGAEVX1_MA1960.2 11 bp overlap

ONECUT2 1 dataset

ChIP PC-3_normoxia GSE106305.ONECUT2.PC-3_normoxia 251 bp overlap

PHOX2B 1 dataset

ChIP CLB-Ga GSE90683.PHOX2B.CLB-Ga 381 bp overlap

PRDM9 1 dataset

Motif DE_48h DE_48h-PRDM9_MA1723.2 20 bp overlap

PROX1 1 dataset

Motif DE_36h DE_36h-PROX1_MA0794.1 12 bp overlap

Prdm5 1 dataset

Motif DE_48h DE_48h-Prdm5_MA1999.2 11 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 322 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 480 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 332 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 268 bp overlap

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 395 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 478 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 292 bp overlap

STAT3 2 datasets

Motif DE_36h DE_36h-STAT3_MA0144.3 9 bp overlap

Motif DE_48h DE_48h-STAT3_MA0144.3 9 bp overlap

TFAP2A 2 datasets

Motif DE_36h DE_36h-TFAP2A_MA0003.5 9 bp overlap

Motif DE_48h DE_48h-TFAP2A_MA0003.5 9 bp overlap

TFAP2C 2 datasets

Motif DE_36h DE_36h-TFAP2C_MA0814.3 9 bp overlap

Motif DE_48h DE_48h-TFAP2C_MA0814.3 9 bp overlap

Genome Browser