chr1 : 220,982,552 220,982,765
213 bp 27 TFs 0 linked genes
This 213 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:220,977,552 – 220,987,765
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
CASZ1 1 dataset
ChIP rhabdomyosarcoma_DOX GSE126142.CASZ1.rhabdomyosarcoma_DOX 131 bp overlap
CTCF 1 dataset
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 148 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 198 bp overlap
FOSL1 3 datasets
ChIP K-562 ENCSR239ZLZ.FOSL1.K-562 89 bp overlap
ChIP K562 ENCFF455MKD 213 bp overlap
ChIP K562 ENCFF728OTE 118 bp overlap
GATA1 2 datasets
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 158 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 133 bp overlap
GATA4 4 datasets
ChIP DE DE-GATA4-1 213 bp overlap
ChIP DE DE-GATA4-2 213 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 213 bp overlap
ChIP foregut GSE117136.GATA4.foregut 208 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 213 bp overlap
ChIP DE DE-GATA6-2 213 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 213 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 213 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 213 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 213 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 213 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 213 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 213 bp overlap
JUN 4 datasets
ChIP DE_D1 S08-DE-d1-JUN-exp1 172 bp overlap
ChIP DE_D1 S40-DE-d1-JUN-exp2 213 bp overlap
ChIP DE_D2 S02-DE-d2-JUN-exp1 213 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 213 bp overlap
MYOD1 2 datasets
ChIP RD_shSNAI2 GSE137168.MYOD1.RD_shSNAI2 53 bp overlap
ChIP RH30_DMSO GSE85169.MYOD1.RH30_DMSO 74 bp overlap
PHIP 1 dataset
ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 141 bp overlap
PROX1 1 dataset
ChIP SW480 GSE60390.PROX1.SW480 70 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 213 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 213 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 213 bp overlap
SMAD2_3 2 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 213 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 180 bp overlap
SMARCA4 2 datasets
ChIP NGP GSE134626.SMARCA4.NGP 70 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 148 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 213 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 162 bp overlap
SPI1 2 datasets
ChIP K-562 ENCSR000BGW.SPI1.K-562 152 bp overlap
ChIP K562 ENCFF410ORC 166 bp overlap
T 2 datasets
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 213 bp overlap
ChIP H9_MESODERM GSE60606.T.H9_MESODERM 154 bp overlap
TAL1 5 datasets
ChIP K-562 GSE107726.TAL1.K-562 213 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 112 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.TAL1.K-562_dCas9-LSD1 115 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 107 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 148 bp overlap
VDR 1 dataset
ChIP kidney-cortex GSE129585.VDR.kidney-cortex 96 bp overlap
YY1 1 dataset
ChIP Hep-G2_RBM25-KD GSE120104.YY1.Hep-G2_RBM25-KD 132 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCFF343DTU 77 bp overlap