chr13 : 56,561,469 – 56,561,609
140 bp 16 TFs 0 linked genes
This 140 bp open chromatin element has no linked target genes and is bound by 16 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:56,556,469 – 56,566,609
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
16 transcription factors
Source
Cell type
AR 1 dataset
ChIP LNCaP_r1881 GSE94682.AR.LNCaP_r1881 77 bp overlap
CDX2 1 dataset
ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 58 bp overlap
CTCF 247 datasets
ChIP 22Rv1 ENCFF466OXN 140 bp overlap
ChIP 22Rv1 ENCFF466OXN 140 bp overlap
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 140 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 140 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 140 bp overlap
ChIP A673 ENCFF123WOM 140 bp overlap
ChIP BC-3 GSE135740.CTCF.BC-3 140 bp overlap
ChIP BE2C ENCFF757SRF 140 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 140 bp overlap
ChIP C4-2B ENCFF821XVN 140 bp overlap
ChIP Caco-2 ENCFF934QYS 140 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 83 bp overlap
ChIP D721Med ENCFF513FYD 140 bp overlap
ChIP GM23338 ENCFF531QOI 140 bp overlap
ChIP GM23338 ENCFF531QOI 105 bp overlap
ChIP GM23338 ENCFF772DML 140 bp overlap
ChIP H1 ENCFF414GZI 140 bp overlap
ChIP H1 ENCFF764RHO 140 bp overlap
ChIP H9 ENCFF152GTF 140 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 140 bp overlap
ChIP HAP1 GSE94992.CTCF.HAP1 140 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 140 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 140 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 140 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 140 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 140 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 140 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 140 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 140 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 140 bp overlap
ChIP HAP1_clone25 GSE152721.CTCF.HAP1_clone25 140 bp overlap
ChIP HEC-1-B GSE139679.CTCF.HEC-1-B 140 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.CTCF.HEC-1-B_F-insertion 140 bp overlap
ChIP HEC-1-B_F-mutation GSE140868.CTCF.HEC-1-B_F-mutation 63 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.CTCF.HEC-1-B_FFRR-insertion 119 bp overlap
ChIP HEC-1-B_FFRR-mutation GSE140868.CTCF.HEC-1-B_FFRR-mutation 82 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.CTCF.HEC-1-B_R1-insertion 132 bp overlap
ChIP HEC-1-B_R1-mutation GSE140868.CTCF.HEC-1-B_R1-mutation 140 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.CTCF.HEC-1-B_RF-insertion 140 bp overlap
ChIP HEC-1-B_RF-mutation GSE140868.CTCF.HEC-1-B_RF-mutation 140 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 140 bp overlap
ChIP HEC-1-B_a12-CBS-deletion GSE140868.CTCF.HEC-1-B_a12-CBS-deletion 140 bp overlap
ChIP HEC-1-B_ac1-CBS-deletion GSE140868.CTCF.HEC-1-B_ac1-CBS-deletion 120 bp overlap
ChIP HEK293 ENCSR000DTW.CTCF.HEK293 101 bp overlap
ChIP HL-60 ERP008568.CTCF.HL-60 140 bp overlap
ChIP HL-60 GSE131577.CTCF.HL-60 131 bp overlap
ChIP HMS001 GSE143026.CTCF.HMS001 129 bp overlap
ChIP HUDEP-2_30min GSE104676.CTCF.HUDEP-2_30min 73 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 140 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 140 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 140 bp overlap
ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 140 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 140 bp overlap
ChIP HeLa-S3_biotin GSE108869.CTCF.HeLa-S3_biotin 140 bp overlap
ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 140 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 140 bp overlap
ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 140 bp overlap
ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 140 bp overlap
ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 140 bp overlap
ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 140 bp overlap
ChIP Hep-G2 ENCSR000DLS.CTCF.Hep-G2 79 bp overlap
ChIP K-562_11698 GSE131349.CTCF.K-562_11698 114 bp overlap
ChIP K-562_13004 GSE131349.CTCF.K-562_13004 111 bp overlap
ChIP K-562_13189 GSE131349.CTCF.K-562_13189 96 bp overlap
ChIP K-562_14259 GSE131349.CTCF.K-562_14259 140 bp overlap
ChIP K-562_14376 GSE131349.CTCF.K-562_14376 97 bp overlap
ChIP K-562_15173 GSE131349.CTCF.K-562_15173 110 bp overlap
ChIP K-562_15776 GSE131349.CTCF.K-562_15776 101 bp overlap
ChIP K-562_7140 GSE131349.CTCF.K-562_7140 140 bp overlap
ChIP K-562_8005 GSE131349.CTCF.K-562_8005 109 bp overlap
ChIP K-562_CRISPRa_N4293 GSE131349.CTCF.K-562_CRISPRa_N4293 140 bp overlap
ChIP KMS-11_NSD2-High GSE131651.CTCF.KMS-11_NSD2-High 133 bp overlap
ChIP Kasumi-1_ctrl GSE121280.CTCF.Kasumi-1_ctrl 117 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 140 bp overlap
ChIP Kelly_resistant_JQ1 GSE103030.CTCF.Kelly_resistant_JQ1 140 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 140 bp overlap
ChIP Kelly_shLUC-res GSE115248.CTCF.Kelly_shLUC-res 140 bp overlap
ChIP LNCAP ENCFF223HIG 140 bp overlap
ChIP LNCAP ENCFF700QXT 140 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 140 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 117 bp overlap
ChIP LNCaP ENCSR000DMF.CTCF.LNCaP 118 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 140 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 140 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 140 bp overlap
ChIP LNCaP_Ctrl GSE125639.CTCF.LNCaP_Ctrl 140 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 140 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 140 bp overlap
ChIP MCF 10A ENCFF988BGF 140 bp overlap
ChIP MCF-10A ERP000783.CTCF.MCF-10A 140 bp overlap
ChIP MCF-7 ENCFF139NQI 140 bp overlap
ChIP MCF-7 ENCFF162GNE 140 bp overlap
ChIP MCF-7 ENCFF198DQX 140 bp overlap
ChIP MCF-7 ENCFF210JUZ 129 bp overlap
ChIP MCF-7 ENCFF494VXA 140 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 GSE137216.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 136 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 129 bp overlap
ChIP MCF-7 ERP000380.CTCF.MCF-7 110 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 140 bp overlap
ChIP MCF-7L_t16 GSE108787.CTCF.MCF-7L_t16 140 bp overlap
ChIP MCF-7_TAM ERP000783.CTCF.MCF-7_TAM 103 bp overlap
ChIP MDA-MB-435_Asynchronous GSE102019.CTCF.MDA-MB-435_Asynchronous 140 bp overlap
ChIP NB4 ENCFF155DNY 140 bp overlap
ChIP NB4 ENCSR000DWN.CTCF.NB4 125 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 140 bp overlap
ChIP NCI-H929 ENCFF305JAB 140 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 134 bp overlap
ChIP NPC GSE115407.CTCF.NPC 132 bp overlap
ChIP OCI-LY3 ENCFF939BYJ 140 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 140 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 140 bp overlap
ChIP OVCAR-8 GSE70764.CTCF.OVCAR-8 140 bp overlap
ChIP PC-3 ENCFF487TUI 140 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 140 bp overlap
ChIP PC-9 ENCFF539ULB 140 bp overlap
ChIP RWPE-1 ENCSR303GFI.CTCF.RWPE-1 140 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 140 bp overlap
ChIP RWPE1 ENCFF200GQF 140 bp overlap
ChIP RWPE2 ENCFF911IEE 140 bp overlap
ChIP SH-SY5Y GSE101295.CTCF.SH-SY5Y 129 bp overlap
ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 140 bp overlap
ChIP SK-N-SH ENCFF575DMG 130 bp overlap
ChIP SK-N-SH ENCFF731NJX 140 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 140 bp overlap
ChIP SK-N-SH ENCSR000EIC.CTCF.SK-N-SH 103 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 140 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 140 bp overlap
ChIP SU-DHL-6 ENCSR125DKL.CTCF.SU-DHL-6 140 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 140 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 137 bp overlap
ChIP T-47D_NaCl-1h GSE111923.CTCF.T-47D_NaCl-1h 140 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 140 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 140 bp overlap
ChIP T-47D_serum GSE120162.CTCF.T-47D_serum 140 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 140 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-020m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-120m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 140 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.CTCF.THP-1_Pam3csk-180m-Flavo-060m 140 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 140 bp overlap
ChIP THP-1_siCtrl-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siCtrl-NS1-Pam3csk-4h 140 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-4h 140 bp overlap
ChIP THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h GSE103477.CTCF.THP-1_siNIPBL-NS1-Pam3csk-7h-Flavo-3h 125 bp overlap
ChIP THP-1_siNIPBL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siNIPBL-eGFP-Pam3csk-4h 98 bp overlap
ChIP THP-1_siWAPL-NS1-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-NS1-Pam3csk-4h 95 bp overlap
ChIP THP-1_siWAPL-eGFP-Pam3csk-4h GSE103477.CTCF.THP-1_siWAPL-eGFP-Pam3csk-4h 55 bp overlap
ChIP VCaP ENCFF858YQT 140 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 140 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 116 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 127 bp overlap
ChIP WERI-Rb-1 ENCSR000DXW.CTCF.WERI-Rb-1 107 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 139 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 140 bp overlap
ChIP brain ENCFF067KUH 140 bp overlap
ChIP brain ENCFF099ASU 140 bp overlap
ChIP brain ENCFF163BBN 140 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 140 bp overlap
ChIP cardiac muscle cell ENCFF777TNC 140 bp overlap
ChIP cardiac-muscle ENCSR713SXF.CTCF.cardiac-muscle 140 bp overlap
ChIP chondrocyte ENCFF134ORZ 140 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 140 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 140 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 140 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 140 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 140 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 140 bp overlap
ChIP endodermal cell ENCFF471YCZ 140 bp overlap
ChIP endodermal cell ENCFF471YCZ 105 bp overlap
ChIP endothelial cell of umbilical vein ENCFF455OQM 140 bp overlap
ChIP endothelial cell of umbilical vein ENCFF677IZD 140 bp overlap
ChIP endothelial cell of umbilical vein ENCFF947JAB 140 bp overlap
ChIP endothelial_umbilical-vein ENCSR000ALA.CTCF.endothelial_umbilical-vein 140 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DVP.CTCF.endothelial_umbilical-vein 140 bp overlap
ChIP endothelial_umbilical-vein ENCSR000DLW.CTCF.endothelial_umbilical-vein 140 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 140 bp overlap
ChIP epithelial cell of prostate ENCFF086GTI 140 bp overlap
ChIP epithelial cell of proximal tubule ENCFF763ZKS 137 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 140 bp overlap
ChIP epithelial_kidney ENCSR000DVH.CTCF.epithelial_kidney 121 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 115 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 140 bp overlap
ChIP epithelial_retinal_pigment ENCSR000DVI.CTCF.epithelial_retinal_pigment 140 bp overlap
ChIP esophagus_squamous-epithelium ENCSR773JBP.CTCF.esophagus_squamous-epithelium 129 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 140 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 140 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 140 bp overlap
ChIP foreskin keratinocyte ENCFF980OWR 140 bp overlap
ChIP glutamatergic neuron ENCFF816BTR 140 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 140 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 121 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 140 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 107 bp overlap
ChIP hepatocyte ENCFF263BLJ 140 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 140 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 127 bp overlap
ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 100 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 121 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 128 bp overlap
ChIP hiPSC_IIA11 GSE106870.CTCF.hiPSC_IIA11 110 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 140 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.CTCF.hiPSC_failed-genome-editing 140 bp overlap
ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 121 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 140 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 140 bp overlap
ChIP leukemia GSE142161.CTCF.leukemia 140 bp overlap
ChIP leukemia_CEBPA-168h GSE142161.CTCF.leukemia_CEBPA-168h 140 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 140 bp overlap
ChIP leukemia_CEBPA-96h GSE142161.CTCF.leukemia_CEBPA-96h 140 bp overlap
ChIP liver ENCFF895ERR 140 bp overlap
ChIP liver ENCSR254YRM.CTCF.liver 114 bp overlap
ChIP liver_right-lobe-of ENCSR911GFJ.CTCF.liver_right-lobe-of 140 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 140 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 140 bp overlap
ChIP nephron ENCFF411ACD 140 bp overlap
ChIP nephron ENCFF589HXU 140 bp overlap
ChIP nephron ENCFF972IQB 140 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 140 bp overlap
ChIP neural cell ENCFF335ADI 140 bp overlap
ChIP neural crest cell ENCFF182LWK 140 bp overlap
ChIP neural progenitor cell ENCFF420RBO 140 bp overlap
ChIP neural progenitor cell ENCFF581WPG 140 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 140 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 140 bp overlap
ChIP placenta ENCFF029PHY 140 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d0 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d0 140 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d3 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d3 140 bp overlap
ChIP primary-epidermal-keratinocyte_diff_d6 GSE84657.CTCF.primary-epidermal-keratinocyte_diff_d6 140 bp overlap
ChIP primary-glioblastoma_G523 GSE121601.CTCF.primary-glioblastoma_G523 137 bp overlap
ChIP primary-glioblastoma_G567 GSE121601.CTCF.primary-glioblastoma_G567 140 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 140 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 102 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 140 bp overlap
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 140 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 140 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 140 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 140 bp overlap
ChIP type B pancreatic cell ENCFF910FNQ 132 bp overlap
ESR1 10 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 140 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 140 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 140 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 140 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 140 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 140 bp overlap
ChIP MCF-7_ER_t60 GSE119057.ESR1.MCF-7_ER_t60 140 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 140 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 140 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 140 bp overlap
HOXB13 1 dataset
ChIP LNCaP GSE96652.HOXB13.LNCaP 140 bp overlap
KDM5B 1 dataset
ChIP T-47D GSE46055.KDM5B.T-47D 108 bp overlap
PGR 1 dataset
ChIP T-47D_VC GSE113607.PGR.T-47D_VC 136 bp overlap
POU2F1 1 dataset
ChIP 22Rv1_Veh GSE123565.POU2F1.22Rv1_Veh 140 bp overlap
RAD21 48 datasets
ChIP H1 ENCFF698EWO 83 bp overlap
ChIP H1 ENCFF967OJF 140 bp overlap
ChIP HAP1 GSE126634.RAD21.HAP1 140 bp overlap
ChIP HAP1 GSE152721.RAD21.HAP1 140 bp overlap
ChIP HAP1_clone25 GSE152721.RAD21.HAP1_clone25 140 bp overlap
ChIP HEC-1-B GSE139679.RAD21.HEC-1-B 140 bp overlap
ChIP HEC-1-B_F-insertion GSE140868.RAD21.HEC-1-B_F-insertion 110 bp overlap
ChIP HEC-1-B_FFRR-insertion GSE140868.RAD21.HEC-1-B_FFRR-insertion 132 bp overlap
ChIP HEC-1-B_R1-insertion GSE140868.RAD21.HEC-1-B_R1-insertion 125 bp overlap
ChIP HEC-1-B_RF-insertion GSE140868.RAD21.HEC-1-B_RF-insertion 140 bp overlap
ChIP HUVEC-C_hypoxia GSE94872.RAD21.HUVEC-C_hypoxia 140 bp overlap
ChIP HUVEC-C_normoxia GSE94872.RAD21.HUVEC-C_normoxia 140 bp overlap
ChIP HeLa-Tet-On GSE112028.RAD21.HeLa-Tet-On 140 bp overlap
ChIP IMR-5 GSE78957.RAD21.IMR-5 105 bp overlap
ChIP Ishikawa ENCFF570JVV 140 bp overlap
ChIP Ishikawa ENCSR000BTU.RAD21.Ishikawa 140 bp overlap
ChIP LoVo_PHASEM GSE51290.RAD21.LoVo_PHASEM 140 bp overlap
ChIP MCF-7 ENCFF694KOM 140 bp overlap
ChIP MCF-7 ENCFF724VCQ 140 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 GSE137216.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 140 bp overlap
ChIP MCF-7_E2 ERP000209.RAD21.MCF-7_E2 140 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 111 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 140 bp overlap
ChIP T-47D_triptolide GSE111923.RAD21.T-47D_triptolide 140 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-000m-Flavo-240m 140 bp overlap
ChIP THP-1_Pam3csk-020m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-020m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-025m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 114 bp overlap
ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-045m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-060m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-120m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-120m-Flavo-000m 140 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.RAD21.THP-1_Pam3csk-150m-Flavo-030m 140 bp overlap
ChIP THP-1_Pam3csk-180m-Flavo-060m GSE103477.RAD21.THP-1_Pam3csk-180m-Flavo-060m 112 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 140 bp overlap
ChIP THP-1_eGFP-IFNb GSE103477.RAD21.THP-1_eGFP-IFNb 140 bp overlap
ChIP WA09 GSE105028.RAD21.WA09 140 bp overlap
ChIP WA09_heat-shock GSE105028.RAD21.WA09_heat-shock 140 bp overlap
ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 140 bp overlap
ChIP hiPSC_failed-genome-editing GSE106870.RAD21.hiPSC_failed-genome-editing 128 bp overlap
ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 140 bp overlap
ChIP liver ENCFF485PAC 140 bp overlap
ChIP liver ENCFF522JHE 140 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 140 bp overlap
SMC1 3 datasets
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 140 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 140 bp overlap
ChIP MCF-10A GSE101921.SMC1.MCF-10A 140 bp overlap
SMC1A 2 datasets
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 89 bp overlap
ChIP MCF-7 GSE76893.SMC1A.MCF-7 117 bp overlap
SMC3 4 datasets
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 140 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 140 bp overlap
ChIP HeLa-Kyoto_WT GSE138405.SMC3.HeLa-Kyoto_WT 140 bp overlap
ChIP neural ENCSR404BPV.SMC3.neural 140 bp overlap
STAG1 8 datasets
ChIP CHRF28811 ERP008568.STAG1.CHRF28811 140 bp overlap
ChIP HCAEC GSE101921.STAG1.HCAEC 140 bp overlap
ChIP HeLa GSE126990.STAG1.HeLa 140 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 140 bp overlap
ChIP MCF-10A GSE101921.STAG1.MCF-10A 140 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 140 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 140 bp overlap
ChIP MCF-7_E2_SHCTCF ERP000209.STAG1.MCF-7_E2_SHCTCF 92 bp overlap
STAG2 4 datasets
ChIP HCAEC GSE101921.STAG2.HCAEC 140 bp overlap
ChIP HL-60 GSE131577.STAG2.HL-60 98 bp overlap
ChIP MCF-10A GSE101921.STAG2.MCF-10A 140 bp overlap
ChIP MCF-10A_siSTAG1 GSE101921.STAG2.MCF-10A_siSTAG1 140 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 113 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 138 bp overlap
Huangfu Lab · Publications · Resources · Contact