chr13 : 40,420,342 40,420,661
319 bp 20 TFs 0 linked genes
This 319 bp open chromatin element has no linked target genes and is bound by 20 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:40,415,342 – 40,425,661
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
20 transcription factors
Source
Cell type
ATF2 2 datasets
ChIP GM12878 ENCFF521LQJ 319 bp overlap
ChIP GM12878 ENCSR000BQK.ATF2.GM12878 187 bp overlap
BORCS8-MEF2B,MEF2B 1 dataset
ChIP GM12878 ENCFF427QAI 319 bp overlap
CBX5 3 datasets
ChIP GM12878 ENCFF542UDC 187 bp overlap
ChIP GM12878 ENCFF542UDC 319 bp overlap
ChIP GM12878 ENCSR372GIN.CBX5.GM12878 139 bp overlap
CTCF 2 datasets
ChIP GSC23 GSE139416.CTCF.GSC23 232 bp overlap
ChIP heart left ventricle ENCFF505HGD 318 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 319 bp overlap
ChIP DE DE-GATA4-2 319 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 319 bp overlap
ChIP DE DE-GATA6-2 319 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 319 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 319 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 317 bp overlap
IRF4 1 dataset
ChIP GM12878 ENCSR000BGY.IRF4.GM12878 199 bp overlap
MEF2B 1 dataset
ChIP GM12878 ENCSR177VFS.MEF2B.GM12878 288 bp overlap
NIPBL 1 dataset
ChIP GM12878 GSE93080.NIPBL.GM12878 137 bp overlap
RBPJ 1 dataset
ChIP NHEK GSE29498.RBPJ.NHEK 319 bp overlap
RUNX3 1 dataset
ChIP GM12878 ENCFF395WHA 254 bp overlap
SND1 2 datasets
ChIP NHEK GSE29498.SND1.NHEK 90 bp overlap
ChIP NHEK GSE29498.SND1.NHEK 182 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 292 bp overlap
STAT1 1 dataset
ChIP GM12878 ENCSR332EYT.STAT1.GM12878 64 bp overlap
TCF12 1 dataset
ChIP GM12878 ENCSR000BGZ.TCF12.GM12878 120 bp overlap
ZNF143 4 datasets
ChIP FLP76_T4 GSE39263.ZNF143.FLP76_T4 116 bp overlap
ChIP GM12878 ENCSR936XTK.ZNF143.GM12878 141 bp overlap
ChIP MCF-7 GSE76454.ZNF143.MCF-7 294 bp overlap
ChIP MCF-7_E2 GSE76454.ZNF143.MCF-7_E2 237 bp overlap
ZSCAN5C 1 dataset
ChIP HEK293 ENCFF343DTU 102 bp overlap