chr13 : 39,126,079 39,126,367
288 bp 35 TFs 0 linked genes
This 288 bp open chromatin element has no linked target genes and is bound by 35 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:39,121,079 – 39,131,367
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
35 transcription factors
Source
Cell type
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 239 bp overlap
EHF 1 dataset
Motif DE_48h DE_48h-EHF_MA0598.4 9 bp overlap
ELF1 1 dataset
Motif DE_48h DE_48h-ELF1_MA0473.4 9 bp overlap
ELF2 1 dataset
Motif DE_48h DE_48h-ELF2_MA1483.3 10 bp overlap
ELF3 1 dataset
Motif DE_48h DE_48h-ELF3_MA0640.3 9 bp overlap
ELF4 1 dataset
Motif DE_48h DE_48h-ELF4_MA0641.1 12 bp overlap
ELK4 1 dataset
Motif DE_48h DE_48h-ELK4_MA0076.3 9 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 253 bp overlap
ETV1 1 dataset
Motif DE_48h DE_48h-ETV1_MA0761.3 9 bp overlap
Elf5 1 dataset
Motif DE_48h DE_48h-Elf5_MA0136.4 8 bp overlap
Erg 1 dataset
Motif DE_48h DE_48h-Erg_MA0474.4 10 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 288 bp overlap
ChIP DE DE-FOXA2-2 199 bp overlap
GABPA 1 dataset
Motif DE_48h DE_48h-GABPA_MA0062.4 10 bp overlap
GATA2 1 dataset
Motif DE_48h DE_48h-GATA2_MA0036.4 7 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 288 bp overlap
ChIP DE DE-GATA4-2 288 bp overlap
Motif DE_48h DE_48h-GATA4_MA0482.3 8 bp overlap
ChIP foregut GSE117136.GATA4.foregut 288 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 288 bp overlap
GATA5 1 dataset
Motif DE_48h DE_48h-GATA5_MA0766.3 8 bp overlap
GATA6 11 datasets
ChIP DE DE-GATA6-1 288 bp overlap
ChIP DE DE-GATA6-2 288 bp overlap
Motif DE_48h DE_48h-GATA6_MA1104.3 8 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 288 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 288 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 288 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 288 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 288 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 288 bp overlap
ChIP foregut GSE117136.GATA6.foregut 288 bp overlap
Gata3 1 dataset
Motif DE_48h DE_48h-Gata3_MA0037.5 8 bp overlap
IKZF2 2 datasets
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Motif DE_48h DE_48h-IKZF2_MA2326.1 6 bp overlap
Ikzf3 1 dataset
Motif DE_48h DE_48h-Ikzf3_MA1992.2 9 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 280 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 273 bp overlap
SMAD2 1 dataset
ChIP endoderm GSE29422.SMAD2.endoderm 187 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 288 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 288 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 288 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 288 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 288 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 288 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 288 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 288 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 204 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 256 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 223 bp overlap
SPIC 1 dataset
Motif DE_48h DE_48h-SPIC_MA0687.2 13 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 230 bp overlap
TRPS1 1 dataset
Motif DE_48h DE_48h-TRPS1_MA1970.2 8 bp overlap
ZBTB11 1 dataset
Motif DE_48h DE_48h-ZBTB11_MA2329.1 9 bp overlap
ZBTB7A 1 dataset
Motif DE_48h DE_48h-ZBTB7A_MA0750.3 9 bp overlap
ZNF175 1 dataset
Motif DE_48h DE_48h-ZNF175_MA2332.1 9 bp overlap