chr13 : 36,296,711 36,297,103
392 bp 21 TFs 2 linked genes
This 392 bp open chromatin element is linked to CCDC169 and CCDC169-SOHLH2 and is bound by 21 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
CCDC169 736 bp At TSS Proximity
CCDC169-SOHLH2 738 bp At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr13:36,291,711 – 36,302,103
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 184 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 374 bp overlap
CHD2 1 dataset
ChIP K-562 ENCSR000EHD.CHD2.K-562 72 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 306 bp overlap
ChIP DE DE-FOXA2-2 299 bp overlap
GATA4 1 dataset
ChIP DE DE-GATA4-1 275 bp overlap
GATA6 2 datasets
ChIP DE DE-GATA6-1 270 bp overlap
ChIP DE DE-GATA6-2 186 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 284 bp overlap
HDAC1 1 dataset
ChIP NB4 GSE126720.HDAC1.NB4 176 bp overlap
HMBOX1 2 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 287 bp overlap
ChIP K562 ENCFF317JJX 392 bp overlap
LHX2 1 dataset
ChIP retina_pigment GSE60024.LHX2.retina_pigment 77 bp overlap
MYC 1 dataset
ChIP SK-N-AS GSE138295.MYC.SK-N-AS 92 bp overlap
NCAPH2 1 dataset
ChIP RMG-I_ARID1A-KO GSE120058.NCAPH2.RMG-I_ARID1A-KO 197 bp overlap
PRDM6 2 datasets
ChIP HEK293 ENCFF283AJL 381 bp overlap
ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 297 bp overlap
SPI1 1 dataset
ChIP U-937 GSE128834.SPI1.U-937 170 bp overlap
TFAP2C 2 datasets
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 205 bp overlap
ChIP UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc GSE101074.TFAP2C.UCLA1-hESCs_TFAP2C--_1d_TFAP2C_Induc 126 bp overlap
ZNF316 3 datasets
ChIP K-562 ENCSR200JYP.ZNF316.K-562 392 bp overlap
ChIP K562 ENCFF281INV 375 bp overlap
ChIP K562 ENCFF838QCD 318 bp overlap