chr12 : 86,838,682 – 86,839,066
384 bp 15 TFs 2 linked genes
This 384 bp open chromatin element is linked to MGAT4C and ENSG00000258185 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MGAT4C at TSS At TSS Proximity
ENSG00000258185 at TSS At TSS Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:86,833,682 – 86,844,066
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD4 1 dataset
ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 319 bp overlap
CTCF 90 datasets
ChIP A-549 ENCSR000AUF.CTCF.A-549 211 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 138 bp overlap
ChIP BE2C ENCFF757SRF 221 bp overlap
ChIP BE2C ENCSR000DQD.CTCF.BE2C 160 bp overlap
ChIP D721Med ENCFF513FYD 157 bp overlap
ChIP GM23338 ENCFF772DML 171 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 109 bp overlap
ChIP HAP1_clone21_CTCF-CRISPR GSE152721.CTCF.HAP1_clone21_CTCF-CRISPR 173 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_1 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_1 154 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 111 bp overlap
ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 141 bp overlap
ChIP Kelly_resistant GSE103030.CTCF.Kelly_resistant 155 bp overlap
ChIP Kelly_sensitive GSE103030.CTCF.Kelly_sensitive 100 bp overlap
ChIP MCF-7 ENCFF139NQI 225 bp overlap
ChIP MCF-7 ENCFF198DQX 187 bp overlap
ChIP MCF-7 ENCFF494VXA 187 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 141 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 128 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 209 bp overlap
ChIP SK-N-SH ENCFF731NJX 200 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 205 bp overlap
ChIP VCaP ENCFF858YQT 338 bp overlap
ChIP ascending aorta ENCFF451CCT 267 bp overlap
ChIP ascending-aorta ENCSR846JKO.CTCF.ascending-aorta 223 bp overlap
ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 111 bp overlap
ChIP brain ENCFF163BBN 203 bp overlap
ChIP chondrocyte ENCFF134ORZ 334 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 114 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 216 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-pos 173 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-neg 190 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 333 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF038KTR 223 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF046GNG 272 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF092NXX 267 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF149PUN 296 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF245PVD 302 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF255MAF 224 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277CZQ 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 270 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF282ONV 277 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF327VLN 299 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 303 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF354RKX 102 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF359BHR 290 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF373BUI 271 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF377YBQ 252 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF394MUG 262 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF406ZHG 292 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF442YDO 227 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF476NBQ 245 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF478RRB 246 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF483ZLP 307 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF514PNC 270 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF628TCI 292 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 320 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF641PIN 242 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF677SUG 313 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF696ASB 309 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF733NZH 291 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF748IBN 290 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF749FBO 298 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF756TDJ 288 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF767LNC 300 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF835ZSJ 322 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 281 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF841TWE 79 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF851XUX 325 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF883PFA 270 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF896AZK 296 bp overlap
ChIP fibroblast of lung ENCFF505HVQ 178 bp overlap
ChIP fibroblast of pulmonary artery ENCFF742RSV 191 bp overlap
ChIP fibroblast of the aortic adventitia ENCFF639DMR 166 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 103 bp overlap
ChIP fibroblast_PULMONARY_ARTERY ENCSR000DUX.CTCF.fibroblast_PULMONARY_ARTERY 117 bp overlap
ChIP gastroesophageal-sphincter ENCSR298ZPF.CTCF.gastroesophageal-sphincter 192 bp overlap
ChIP heart ENCSR232OFD.CTCF.heart 228 bp overlap
ChIP heart left ventricle ENCFF548XHH 261 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 156 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 151 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 139 bp overlap
ChIP islet ERP004003.CTCF.islet 102 bp overlap
ChIP medulloblastoma ENCSR000DMY.CTCF.medulloblastoma 131 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 341 bp overlap
ChIP neural cell ENCFF335ADI 297 bp overlap
ChIP neuron_bipolar_doxy_4d ENCSR619IUE.CTCF.neuron_bipolar_doxy_4d 102 bp overlap
ChIP osteocyte ENCFF929FPD 284 bp overlap
ChIP right atrium auricular region ENCFF696NTN 297 bp overlap
ChIP right lobe of liver ENCFF011NDG 113 bp overlap
ChIP tibial-nerve ENCSR875NEW.CTCF.tibial-nerve 111 bp overlap
EP300 2 datasets
ChIP neural ENCSR843ZUP.EP300.neural 243 bp overlap
ChIP neural cell ENCFF442QNK 338 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 134 bp overlap
HAND2 1 dataset
ChIP SK-N-BE2-C GSE94822.HAND2.SK-N-BE2-C 268 bp overlap
NCOA2 1 dataset
ChIP MCF-7 ERP000901.NCOA2.MCF-7 194 bp overlap
NR3C1 1 dataset
ChIP Ishikawa ENCSR000BJC.NR3C1.Ishikawa 101 bp overlap
PAX7 1 dataset
ChIP H9_DOX GSE98976.PAX7.H9_DOX 191 bp overlap
POLR2A 1 dataset
ChIP neural cell ENCFF604SPB 372 bp overlap
RAD21 11 datasets
ChIP A-549 ENCSR000BUC.RAD21.A-549 114 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 153 bp overlap
ChIP MCF-7 GSE72082.RAD21.MCF-7 140 bp overlap
ChIP MCF-7 ENCSR000BTQ.RAD21.MCF-7 139 bp overlap
ChIP SK-N-SH ENCFF747MAS 186 bp overlap
ChIP SK-N-SH ENCSR000EHX.RAD21.SK-N-SH 153 bp overlap
ChIP hiPSC_IV8 GSE106870.RAD21.hiPSC_IV8 153 bp overlap
ChIP liver ENCFF485PAC 301 bp overlap
ChIP liver ENCFF522JHE 256 bp overlap
ChIP neural ENCSR198ZYJ.RAD21.neural 361 bp overlap
ChIP neural cell ENCFF564MOT 257 bp overlap
REST 3 datasets
ChIP hippocampus GSE144226.REST.hippocampus 278 bp overlap
ChIP neural ENCSR000BTV.REST.neural 384 bp overlap
ChIP neural cell ENCFF882LXX 271 bp overlap
SMARCA2 1 dataset
ChIP NPC_K755R-siCT GSE122631.SMARCA2.NPC_K755R-siCT 287 bp overlap
SMC3 2 datasets
ChIP neural ENCSR404BPV.SMC3.neural 331 bp overlap
ChIP neural cell ENCFF795YGY 209 bp overlap
STAG1 4 datasets
ChIP HeLa GSE126990.STAG1.HeLa 149 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 149 bp overlap
ChIP MCF-7 ERP000209.STAG1.MCF-7 134 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 166 bp overlap
ZNF766 1 dataset
ChIP HEK293T GSE78099.ZNF766.HEK293T 97 bp overlap
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