chr12 : 55,999,651 56,000,093
442 bp 19 TFs 2 linked genes
This 442 bp open chromatin element is linked to SUOX and IKZF4 and is bound by 19 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SUOX 2.4 kb Proximal Proximity
IKZF4 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:55,994,651 – 56,005,093
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
CTCF 3 datasets
ChIP 22Rv1 ENCFF466OXN 168 bp overlap
ChIP DND-41 ENCFF913MRA 161 bp overlap
ChIP MCF-7 ENCFF844STM 54 bp overlap
DR1 2 datasets
ChIP HepG2 ENCFF818WYO 320 bp overlap
ChIP HepG2 ENCFF818WYO 358 bp overlap
DRAP1 1 dataset
ChIP HepG2 ENCFF296JHR 320 bp overlap
E4F1 1 dataset
ChIP K562 ENCFF622HMZ 428 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 419 bp overlap
ChIP DE DE-FOXA2-2 442 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 436 bp overlap
ChIP DE DE-GATA4-2 442 bp overlap
GATA6 3 datasets
ChIP DE DE-GATA6-1 424 bp overlap
ChIP DE DE-GATA6-2 419 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 373 bp overlap
NFYA 2 datasets
ChIP HepG2 ENCFF883OMO 359 bp overlap
ChIP HepG2 ENCFF883OMO 287 bp overlap
NFYB 6 datasets
ChIP GM12878 ENCFF474DNH 277 bp overlap
ChIP GM12878 ENCFF474DNH 336 bp overlap
ChIP HepG2 ENCFF174VYX 268 bp overlap
ChIP HepG2 ENCFF174VYX 307 bp overlap
ChIP K-562 ENCSR000EGQ.NFYB.K-562 150 bp overlap
ChIP K562 ENCFF709RXX 80 bp overlap
NFYC 2 datasets
ChIP HepG2 ENCFF836FYP 224 bp overlap
ChIP HepG2 ENCFF836FYP 319 bp overlap
POLR2A 6 datasets
ChIP HCT116 ENCFF849NGT 286 bp overlap
ChIP HepG2 ENCFF350RIU 166 bp overlap
ChIP HepG2 ENCFF718XAJ 146 bp overlap
ChIP HepG2 ENCFF736SLT 68 bp overlap
ChIP Raji ENCFF613VGX 302 bp overlap
ChIP erythroblast ENCFF498VMR 431 bp overlap
POLR2G 1 dataset
ChIP HepG2 ENCFF508UTS 214 bp overlap
RBFOX2 1 dataset
ChIP K562 ENCFF967GRF 63 bp overlap
SMAD2_3 4 datasets
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 290 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 366 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 442 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 442 bp overlap
SOX13 1 dataset
ChIP HepG2 ENCFF062VSQ 266 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 442 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 442 bp overlap
ZBTB38 1 dataset
ChIP HepG2 ENCFF875UQX 143 bp overlap
ZMYM4 2 datasets
ChIP HepG2 ENCFF567SQY 370 bp overlap
ChIP HepG2 ENCFF567SQY 423 bp overlap