chr12 : 21,430,103 21,430,275
172 bp 19 TFs 1 linked gene
This 172 bp open chromatin element is linked to PYROXD1 and is bound by 19 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
PYROXD1 7.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:21,425,103 – 21,435,275
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
19 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 134 bp overlap
BRD3 1 dataset
ChIP HEK293T GSE39579.BRD3.HEK293T 122 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
CREB1 1 dataset
ChIP A-549 ENCSR000BRB.CREB1.A-549 129 bp overlap
CRX 2 datasets
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 145 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 134 bp overlap
CTCF 2 datasets
ChIP retina_Hu25 GSE137311.CTCF.retina_Hu25 172 bp overlap
ChIP retina_Hu6 GSE137311.CTCF.retina_Hu6 172 bp overlap
DPF1 1 dataset
ChIP K-562 GSE97661.DPF1.K-562 144 bp overlap
MEF2D 2 datasets
ChIP retina_Hu13 GSE137311.MEF2D.retina_Hu13 172 bp overlap
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 142 bp overlap
MITF 3 datasets
ChIP 501-mel GSE137522.MITF.501-mel 172 bp overlap
ChIP 501-mel_20ng_K243R GSE137522.MITF.501-mel_20ng_K243R 172 bp overlap
ChIP 501-mel_K243Q GSE137522.MITF.501-mel_K243Q 172 bp overlap
NEUROD1 4 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 172 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 172 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 172 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 172 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 172 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 94 bp overlap
USF1 12 datasets
ChIP H1 ENCFF090WVU 172 bp overlap
ChIP HCT-116 ENCSR000BVK.USF1.HCT-116 172 bp overlap
ChIP HCT116 ENCFF330PYP 172 bp overlap
ChIP Hep-G2 ENCSR000BGM.USF1.Hep-G2 117 bp overlap
ChIP HepG2 ENCFF201JKA 172 bp overlap
ChIP HepG2 ENCFF807KYJ 172 bp overlap
ChIP Ishikawa ENCFF728IEG 172 bp overlap
ChIP Ishikawa ENCSR000BSX.USF1.Ishikawa 168 bp overlap
ChIP K-562 ENCSR000BKT.USF1.K-562 172 bp overlap
ChIP K562 ENCFF633EZB 172 bp overlap
ChIP SK-N-SH ENCSR000BMF.USF1.SK-N-SH 172 bp overlap
ChIP WA01 ENCSR000BIU.USF1.WA01 172 bp overlap
USF2 4 datasets
ChIP GM12878 GSE97661.USF2.GM12878 151 bp overlap
ChIP HeLa-S3 ENCSR000ECW.USF2.HeLa-S3 139 bp overlap
ChIP WA01 ENCSR000ECD.USF2.WA01 120 bp overlap
ChIP WTC11 ENCFF139JAW 172 bp overlap
ZBTB42 1 dataset
ChIP HEK293 GSE76494.ZBTB42.HEK293 139 bp overlap
ZEB1 1 dataset
ChIP GM12878 ENCSR000BND.ZEB1.GM12878 142 bp overlap
ZNF143 1 dataset
ChIP FLP143HA_T4 GSE39263.ZNF143.FLP143HA_T4 145 bp overlap