chr12 : 11,917,619 11,917,821
202 bp 26 TFs 0 linked genes
This 202 bp open chromatin element has no linked target genes and is bound by 26 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr12:11,912,619 – 11,922,821
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
26 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP NMC24335 GSE96775.BRD4.NMC24335 202 bp overlap
ChIP cortical-interneuron GSE117508.BRD4.cortical-interneuron 182 bp overlap
CTCF 1 dataset
ChIP GSC23 GSE139416.CTCF.GSC23 164 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 138 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 166 bp overlap
ERG 1 dataset
ChIP VCaP_R1881 GSE49091.ERG.VCaP_R1881 100 bp overlap
EZH2 1 dataset
ChIP SU-DHL-5 GSE45982.EZH2.SU-DHL-5 85 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 202 bp overlap
ChIP DE DE-FOXA2-2 202 bp overlap
GABPA 1 dataset
ChIP VCaP GSE49091.GABPA.VCaP 76 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-2 202 bp overlap
ChIP foregut GSE117136.GATA4.foregut 167 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 114 bp overlap
GATA6 8 datasets
ChIP AGS GSE51936.GATA6.AGS 69 bp overlap
ChIP DE DE-GATA6-1 165 bp overlap
ChIP DE DE-GATA6-2 202 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 202 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 202 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 202 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 202 bp overlap
ChIP foregut GSE117136.GATA6.foregut 127 bp overlap
HNF1B 1 dataset
ChIP foregut GSE117136.HNF1B.foregut 157 bp overlap
HNF4A 1 dataset
ChIP IM95 GSE114018.HNF4A.IM95 149 bp overlap
INTS11 1 dataset
ChIP HeLa GSE125534.INTS11.HeLa 120 bp overlap
JUN 2 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 202 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 202 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 202 bp overlap
NUTM1 1 dataset
ChIP NMC24335 GSE96775.NUTM1.NMC24335 202 bp overlap
PDX1 1 dataset
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 85 bp overlap
POU2F3 1 dataset
ChIP NCI-H1048 GSE115123.POU2F3.NCI-H1048 133 bp overlap
POU5F1 1 dataset
ChIP DE_D1 DED1-OCT4_Batch_II 187 bp overlap
POU5F1_M 1 dataset
ChIP DE_D1 DED1-OCT4-M_Batch_II 175 bp overlap
SMAD2 2 datasets
ChIP endoderm GSE29422.SMAD2.endoderm 202 bp overlap
ChIP hESC_YAP-_activinA_15h GSE99202.SMAD2.hESC_YAP-_activinA_15h 202 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 202 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 202 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 202 bp overlap
SMAD2_3 5 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 202 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 202 bp overlap
ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 202 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 202 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 202 bp overlap
SMAD3 5 datasets
ChIP BG03_DIFF_48H GSE36578.SMAD3.BG03_DIFF_48H 158 bp overlap
ChIP HCC1954_TGFb GSE104760.SMAD3.HCC1954_TGFb 202 bp overlap
ChIP HMLE_Doxycicline_TGFb GSE104760.SMAD3.HMLE_Doxycicline_TGFb 202 bp overlap
ChIP HMLE_TGFb GSE104760.SMAD3.HMLE_TGFb 170 bp overlap
ChIP endoderm GSE29422.SMAD3.endoderm 202 bp overlap
SMAD4 1 dataset
ChIP endoderm GSE29422.SMAD4.endoderm 197 bp overlap
SMC3 1 dataset
ChIP GP5D GSE51234.SMC3.GP5D 82 bp overlap