chr11 : 7,571,061 – 7,571,376
315 bp 21 TFs 2 linked genes
This 315 bp open chromatin element is linked to ENSG00000254864 and PPFIBP2 and is bound by 21 transcription factors.
Linked Genes
2 genes
Distance
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
ENSG00000254864 669 bp At TSS Proximity
PPFIBP2 5.0 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr11:7,566,061 – 7,576,376
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
21 transcription factors
Source
Cell type
ARNTL 1 dataset
ChIP U2OS_DMOG GSE85096.ARNTL.U2OS_DMOG 209 bp overlap
CTCF 119 datasets
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 315 bp overlap
ChIP AG09319 ENCFF401ZTN 208 bp overlap
ChIP C4-2B ENCFF821XVN 92 bp overlap
ChIP CD14 ENCSR000ATN.CTCF.CD14 219 bp overlap
ChIP Caco-2 ENCFF934QYS 161 bp overlap
ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 120 bp overlap
ChIP GM04025_B-lymphocytes GSE111170.CTCF.GM04025_B-lymphocytes 166 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 239 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 171 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 182 bp overlap
ChIP GM09237_B-lymphocytes GSE111170.CTCF.GM09237_B-lymphocytes 164 bp overlap
ChIP GM10266 ENCFF241YYF 177 bp overlap
ChIP GM12864 ENCFF357DQE 209 bp overlap
ChIP GM12864 ENCSR000DRB.CTCF.GM12864 157 bp overlap
ChIP GM12873 ENCSR000DRP.CTCF.GM12873 120 bp overlap
ChIP GM12874 ENCFF942MTD 228 bp overlap
ChIP GM12874 ENCSR000DRR.CTCF.GM12874 128 bp overlap
ChIP GM12875 ENCFF081UCQ 196 bp overlap
ChIP GM12878 ENCFF511URZ 182 bp overlap
ChIP GM13977 ENCFF528ESQ 141 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 270 bp overlap
ChIP GM23338 ENCFF772DML 176 bp overlap
ChIP H1 ENCFF414GZI 179 bp overlap
ChIP H1 ENCFF764RHO 237 bp overlap
ChIP H9 ENCFF152GTF 189 bp overlap
ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 169 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 152 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 245 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 315 bp overlap
ChIP ID00016 GSE76922.CTCF.ID00016 259 bp overlap
ChIP LNCaP ENCSR315NAC.CTCF.LNCaP 272 bp overlap
ChIP LNCaP ENCSR000DME.CTCF.LNCaP 128 bp overlap
ChIP LNCaP clone FGC ENCFF519YVI 140 bp overlap
ChIP LNCaP clone FGC ENCFF957KCI 140 bp overlap
ChIP LNCaP_hydroxy_10nM_4h ENCSR673WZL.CTCF.LNCaP_hydroxy_10nM_4h 299 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 270 bp overlap
ChIP MCF-10CA1a GSE98551.CTCF.MCF-10CA1a 136 bp overlap
ChIP MCF-7 ENCFF139NQI 208 bp overlap
ChIP MCF-7 ENCFF198DQX 192 bp overlap
ChIP MCF-7 ENCFF494VXA 189 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 206 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 163 bp overlap
ChIP MCF-7 ENCSR000DMR.CTCF.MCF-7 162 bp overlap
ChIP MCF-7 ENCSR000DMS.CTCF.MCF-7 118 bp overlap
ChIP MCF-7 ENCSR000AHD.CTCF.MCF-7 129 bp overlap
ChIP MCF-7_TAM ERP000380.CTCF.MCF-7_TAM 133 bp overlap
ChIP MDA-MB-157 GSE116868.CTCF.MDA-MB-157 263 bp overlap
ChIP MM1-S ENCSR402IDP.CTCF.MM1-S 257 bp overlap
ChIP NB69 GSE101295.CTCF.NB69 149 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 222 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 154 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 227 bp overlap
ChIP Panc1 ENCFF056JQX 65 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 217 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 237 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 236 bp overlap
ChIP T-47D GSE120162.CTCF.T-47D 140 bp overlap
ChIP T-47D_Y537S GSE148277.CTCF.T-47D_Y537S 272 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 208 bp overlap
ChIP VCaP ENCSR265ARE.CTCF.VCaP 315 bp overlap
ChIP VCaP_ETOH GSE84432.CTCF.VCaP_ETOH 162 bp overlap
ChIP VCaP_R1881 GSE84432.CTCF.VCaP_R1881 168 bp overlap
ChIP WA01 ENCSR000BNH.CTCF.WA01 148 bp overlap
ChIP WA01 ENCSR000DLK.CTCF.WA01 113 bp overlap
ChIP ZR751 ERP000783.CTCF.ZR751 153 bp overlap
ChIP astrocyte of the cerebellum ENCFF511OCS 257 bp overlap
ChIP bonchial_epithelial ENCSR000DXI.CTCF.bonchial_epithelial 164 bp overlap
ChIP breast_epithelium ENCSR697YIN.CTCF.breast_epithelium 178 bp overlap
ChIP bronchial epithelial cell ENCFF500SEA 199 bp overlap
ChIP choroid-plexus_epithelial ENCSR000DTL.CTCF.choroid-plexus_epithelial 114 bp overlap
ChIP cortical-interneuron_KCl-neg_JQ1-neg GSE117508.CTCF.cortical-interneuron_KCl-neg_JQ1-neg 137 bp overlap
ChIP cortical-interneuron_KCl-pos_JQ1-pos GSE117508.CTCF.cortical-interneuron_KCl-pos_JQ1-pos 268 bp overlap
ChIP delta-47 GSE70764.CTCF.delta-47 222 bp overlap
ChIP endodermal cell ENCFF471YCZ 210 bp overlap
ChIP epithelial cell of esophagus ENCFF946GGT 228 bp overlap
ChIP epithelial_esophagus ENCSR000DTR.CTCF.epithelial_esophagus 146 bp overlap
ChIP epithelial_mammary ENCSR000DUS.CTCF.epithelial_mammary 151 bp overlap
ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 166 bp overlap
ChIP esophagus squamous epithelium ENCFF037IYT 260 bp overlap
ChIP esophagus_squamous-epithelium ENCSR450FRI.CTCF.esophagus_squamous-epithelium 315 bp overlap
ChIP esophagus_squamous-epithelium ENCSR838RUX.CTCF.esophagus_squamous-epithelium 244 bp overlap
ChIP fibroblast_AORTIC_ADVENTITIA ENCSR000DPY.CTCF.fibroblast_AORTIC_ADVENTITIA 147 bp overlap
ChIP fibroblast_CARDIAC ENCSR000DTF.CTCF.fibroblast_CARDIAC 113 bp overlap
ChIP fibroblast_FORESKIN ENCSR000DWQ.CTCF.fibroblast_FORESKIN 168 bp overlap
ChIP fibroblast_GINGIVA ENCSR000DPS.CTCF.fibroblast_GINGIVA 315 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 160 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 216 bp overlap
ChIP hESC_D7 GSE116862.CTCF.hESC_D7 229 bp overlap
ChIP hESC_D80 GSE116862.CTCF.hESC_D80 68 bp overlap
ChIP hepatocyte ENCFF263BLJ 243 bp overlap
ChIP hepatocyte ENCSR252QYR.CTCF.hepatocyte 315 bp overlap
ChIP hepatocyte ERP000395.CTCF.hepatocyte 177 bp overlap
ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 137 bp overlap
ChIP hiPSC_IB7 GSE106870.CTCF.hiPSC_IB7 133 bp overlap
ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 153 bp overlap
ChIP hiPSC_Prader-Willi GSE117283.CTCF.hiPSC_Prader-Willi 140 bp overlap
ChIP islet ERP004003.CTCF.islet 155 bp overlap
ChIP keratinocyte ENCFF046PBT 173 bp overlap
ChIP keratinocyte ENCFF291YDC 173 bp overlap
ChIP keratinocyte ENCFF667ULX 233 bp overlap
ChIP keratinocyte ENCSR000DWX.CTCF.keratinocyte 251 bp overlap
ChIP keratinocyte ENCSR000DNC.CTCF.keratinocyte 134 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 66 bp overlap
ChIP mammary epithelial cell ENCFF164SPU 228 bp overlap
ChIP neural ENCSR822CEA.CTCF.neural 315 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 243 bp overlap
ChIP osteoblast ENCSR000APF.CTCF.osteoblast 146 bp overlap
ChIP pancreas_body ENCSR484DDO.CTCF.pancreas_body 198 bp overlap
ChIP primary-glioblastoma_G583 GSE121601.CTCF.primary-glioblastoma_G583 153 bp overlap
ChIP progenitor cell of endocrine pancreas ENCFF492KHV 277 bp overlap
ChIP prostate gland ENCFF655GBO 256 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 315 bp overlap
ChIP prostate_gland ENCSR720USO.CTCF.prostate_gland 182 bp overlap
ChIP prostate_gland ENCSR829HTO.CTCF.prostate_gland 187 bp overlap
ChIP retinal pigment epithelial cell ENCFF810AAG 213 bp overlap
ChIP smooth-muscle-cell ENCSR261VAS.CTCF.smooth-muscle-cell 97 bp overlap
ChIP thyroid gland ENCFF204HWS 279 bp overlap
ChIP thyroid-gland ENCSR492ZIW.CTCF.thyroid-gland 276 bp overlap
ChIP thyroid-gland ENCSR955BIB.CTCF.thyroid-gland 163 bp overlap
ESR1 4 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 178 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 166 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 153 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 173 bp overlap
EZH2 1 dataset
ChIP RH30_DMSO GSE85169.EZH2.RH30_DMSO 277 bp overlap
FOXA1 2 datasets
ChIP breast-cancer_Veh-2856 GSE128018.FOXA1.breast-cancer_Veh-2856 149 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 315 bp overlap
FOXA2 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 315 bp overlap
GATA4 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 315 bp overlap
MAX 1 dataset
ChIP NCI-H2171 GSE41105.MAX.NCI-H2171 187 bp overlap
NANOG 1 dataset
ChIP HUES-8 GSE109524.NANOG.HUES-8 279 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 154 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 85 bp overlap
OLIG2 1 dataset
ChIP brain-prefrontal-cortex_2017039 GSE129039.OLIG2.brain-prefrontal-cortex_2017039 97 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 254 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 303 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 248 bp overlap
RAD21 7 datasets
ChIP H1 ENCFF698EWO 197 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 224 bp overlap
ChIP HEK293_siYAP GSE130135.RAD21.HEK293_siYAP 223 bp overlap
ChIP MCF-7 ENCSR703TNG.RAD21.MCF-7 164 bp overlap
ChIP MCF-7 ERP000209.RAD21.MCF-7 117 bp overlap
ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.RAD21.THP-1_Pam3csk-360m-Flavo-240m 167 bp overlap
ChIP liver ENCFF522JHE 133 bp overlap
SMC1 2 datasets
ChIP HAP1 GSE94992.SMC1.HAP1 155 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.SMC1.HAP1_WaplKO-33 235 bp overlap
SMC1A 1 dataset
ChIP Hep-G2 GSE76893.SMC1A.Hep-G2 142 bp overlap
STAG1 2 datasets
ChIP MCF-7 ERP000209.STAG1.MCF-7 126 bp overlap
ChIP MCF-7_E2 ERP000209.STAG1.MCF-7_E2 236 bp overlap
TEAD1 1 dataset
ChIP pancreas_12D ERP008682.TEAD1.pancreas_12D 143 bp overlap
YY1 1 dataset
ChIP WA01 ENCSR000BKD.YY1.WA01 139 bp overlap
ZBTB2 1 dataset
ChIP GM12878 GSE97661.ZBTB2.GM12878 118 bp overlap
ZNF143 1 dataset
ChIP WA01 ENCSR000EBW.ZNF143.WA01 125 bp overlap
Huangfu Lab · Publications · Resources · Contact