chr10 : 99,370,159 99,370,697
538 bp 14 TFs 6 linked genes
This 538 bp open chromatin element is linked to 6 target genes and is bound by 14 transcription factors.
Linked Genes
6 genes
Link type
Gene Expression Dist. to TSS Distance Link type
CNNM1 41.0 kb Distal Multiome
GOT1 60.2 kb Distal Multiome
SLC25A28 250.0 kb Distal Multiome
ENTPD7 289.1 kb Distal Multiome
HPS1 923.5 kb Distal Multiome+HiCAR
PYROXD2 955.2 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr10:99,365,159 – 99,375,697
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
CTCF 2 datasets
ChIP HT-1080 GSE135580.CTCF.HT-1080 110 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 164 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 326 bp overlap
ESR1 1 dataset
ChIP MCF-7_E2 GSE14664.ESR1.MCF-7_E2 94 bp overlap
ETS1 1 dataset
ChIP cardiomyocyte_D2 GSE129986.ETS1.cardiomyocyte_D2 195 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 459 bp overlap
ChIP DE DE-FOXA2-2 367 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 538 bp overlap
ChIP DE DE-GATA4-2 538 bp overlap
GATA6 7 datasets
ChIP DE DE-GATA6-1 538 bp overlap
ChIP DE DE-GATA6-2 538 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 333 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 445 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 343 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 214 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 312 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 341 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 374 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 402 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 273 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 413 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 274 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 157 bp overlap