chr9 : 96,101,387 96,101,724
337 bp 22 TFs 0 linked genes
This 337 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:96,096,387 – 96,106,724
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
Cebpa 1 dataset
ChIP BLaER1 ENCFF335XTP 51 bp overlap
Dux 1 dataset
Motif DE_72h DE_72h-Dux_MA0611.3 11 bp overlap
FEZF2 1 dataset
Motif DE_72h DE_72h-FEZF2_MA2341.1 8 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 337 bp overlap
ChIP DE DE-FOXA2-2 337 bp overlap
GATA1 1 dataset
Motif DE_72h DE_72h-GATA1_MA0035.5 7 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 337 bp overlap
ChIP DE DE-GATA4-2 337 bp overlap
GATA6 9 datasets
ChIP DE DE-GATA6-1 337 bp overlap
ChIP DE DE-GATA6-2 337 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 337 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 337 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 337 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 337 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 287 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 256 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 294 bp overlap
GRHL1 1 dataset
Motif DE_72h DE_72h-GRHL1_MA0647.2 10 bp overlap
MEIS1 1 dataset
Motif DE_72h DE_72h-MEIS1_MA0498.3 5 bp overlap
REST 1 dataset
Motif DE_72h DE_72h-REST_MA0138.3 20 bp overlap
RFX1 1 dataset
ChIP K562 ENCFF809XVG 294 bp overlap
SIX2 1 dataset
Motif DE_72h DE_72h-SIX2_MA1119.2 11 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 238 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 307 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 337 bp overlap
TFCP2 1 dataset
Motif DE_72h DE_72h-TFCP2_MA1968.2 9 bp overlap
ZNF28 1 dataset
ChIP HEK293T GSE78099.ZNF28.HEK293T 51 bp overlap
ZNF449 1 dataset
Motif DE_72h DE_72h-ZNF449_MA1656.2 10 bp overlap
ZNF770 1 dataset
Motif DE_72h DE_72h-ZNF770_MA2099.1 8 bp overlap