chr9 : 32,950,445 32,951,255
810 bp 12 TFs 5 linked genes
This 810 bp open chromatin element is linked to 5 target genes and is bound by 12 transcription factors.
Linked Genes
5 genes
Link type
Gene Expression Dist. to TSS Distance Link type
APTX 50.8 kb Distal Multiome
DNAJA1 74.4 kb Distal Multiome
SMU1 125.8 kb Distal Multiome
B4GALT1 216.5 kb Distal Multiome
NDUFB6 377.7 kb Distal Multiome+HiCAR
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:32,945,445 – 32,956,255
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
12 transcription factors
Source
Cell type
CTCF 1 dataset
ChIP endodermal cell ENCFF471YCZ 461 bp overlap
Cebpa 4 datasets
ChIP BLaER1 ENCFF031ISE 306 bp overlap
ChIP BLaER1 ENCFF262VBH 330 bp overlap
ChIP BLaER1 ENCFF364PUR 251 bp overlap
ChIP BLaER1 ENCFF460KDD 287 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 425 bp overlap
ChIP DE DE-GATA4-2 554 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 504 bp overlap
ChIP DE DE-GATA6-2 609 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 325 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 302 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 379 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 515 bp overlap
JUN 1 dataset
ChIP DE_D2 S02-DE-d2-JUN-exp1 432 bp overlap
RBPJ 1 dataset
Motif DE_60h DE_60h-RBPJ_MA1116.2 6 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 403 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 400 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 515 bp overlap
ZNF143 1 dataset
Motif DE_60h DE_60h-ZNF143_MA0088.2 16 bp overlap
ZNF75A 1 dataset
Motif DE_60h DE_60h-ZNF75A_MA2097.1 12 bp overlap
ZNF75D 1 dataset
Motif DE_60h DE_60h-ZNF75D_MA1601.2 12 bp overlap
ZNF76 1 dataset
Motif DE_60h DE_60h-ZNF76_MA1716.2 17 bp overlap