chr9 : 14,442,152 – 14,442,273
121 bp 22 TFs 0 linked genes
This 121 bp open chromatin element has no linked target genes and is bound by 22 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr9:14,437,152 – 14,447,273
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
ARID1B 1 dataset
ChIP K-562 ENCSR822CCM.ARID1B.K-562 91 bp overlap
ATF1 1 dataset
ChIP K-562 ENCSR091GVJ.ATF1.K-562 95 bp overlap
CBFA2T2 2 datasets
ChIP K-562 ENCSR699PVC.CBFA2T2.K-562 121 bp overlap
ChIP K562 ENCFF963TXY 121 bp overlap
CBFA2T3 2 datasets
ChIP K-562 ENCSR697YLJ.CBFA2T3.K-562 121 bp overlap
ChIP K562 ENCFF673OEZ 108 bp overlap
CTCF 104 datasets
ChIP 22Rv1 ENCSR857PBV.CTCF.22Rv1 119 bp overlap
ChIP 22Rv1_hydroxy_10nM_4h ENCSR847XGE.CTCF.22Rv1_hydroxy_10nM_4h 83 bp overlap
ChIP 786-O_NORMOXIA GSE78113.CTCF.786-O_NORMOXIA 121 bp overlap
ChIP A-549 ENCSR000AUF.CTCF.A-549 121 bp overlap
ChIP A-549 ENCSR000AUE.CTCF.A-549 121 bp overlap
ChIP A-549 ENCSR000DPF.CTCF.A-549 121 bp overlap
ChIP A-673 ENCSR611JJS.CTCF.A-673 121 bp overlap
ChIP C4-2B ENCFF821XVN 75 bp overlap
ChIP C4-2B ENCFF821XVN 66 bp overlap
ChIP DOHH2 ENCFF637WNW 77 bp overlap
ChIP DOHH2 ENCSR084RDK.CTCF.DOHH2 121 bp overlap
ChIP GM04604 GSE148179.CTCF.GM04604 94 bp overlap
ChIP GM04648 GSE148179.CTCF.GM04648 89 bp overlap
ChIP GM09236__B-lymphocytes GSE111170.CTCF.GM09236__B-lymphocytes 61 bp overlap
ChIP GM12871 ENCSR000DRL.CTCF.GM12871 55 bp overlap
ChIP GM12878 GSE76922.CTCF.GM12878 52 bp overlap
ChIP GM17942 GSE76922.CTCF.GM17942 53 bp overlap
ChIP GM23338 ENCFF832KWE 120 bp overlap
ChIP GP5D GSE51234.CTCF.GP5D 121 bp overlap
ChIP H9 ENCFF152GTF 52 bp overlap
ChIP HAP1 GSE152721.CTCF.HAP1 80 bp overlap
ChIP HAP1_2kb GSE152721.CTCF.HAP1_2kb 57 bp overlap
ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 76 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.CTCF.HAP1_WaplKO-33_SCC4KO 121 bp overlap
ChIP HAP1_clone21 GSE152721.CTCF.HAP1_clone21 91 bp overlap
ChIP HAP1_clone21_CTCF-TSS-CRISPR_2 GSE152721.CTCF.HAP1_clone21_CTCF-TSS-CRISPR_2 70 bp overlap
ChIP HCT-116 GSE131606.CTCF.HCT-116 121 bp overlap
ChIP HCT-116 ENCSR240PRQ.CTCF.HCT-116 121 bp overlap
ChIP HCT-116 ENCSR000DTO.CTCF.HCT-116 71 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.CTCF.HCT-116_RAD21-mAC 121 bp overlap
ChIP HCT-116_RAD21-mAC_500uM_auxin GSE104888.CTCF.HCT-116_RAD21-mAC_500uM_auxin 121 bp overlap
ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 59 bp overlap
ChIP HFF ENCSR000DUM.CTCF.HFF 62 bp overlap
ChIP HT-1080 GSE135580.CTCF.HT-1080 121 bp overlap
ChIP HeLa GSE126990.CTCF.HeLa 59 bp overlap
ChIP HeLa-Kyoto GSE138405.CTCF.HeLa-Kyoto 59 bp overlap
ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 121 bp overlap
ChIP HeLa-S3_unsynchro GSE108173.CTCF.HeLa-S3_unsynchro 77 bp overlap
ChIP Hep-G2 ENCSR000AMA.CTCF.Hep-G2 68 bp overlap
ChIP K-562 ENCSR000AKO.CTCF.K-562 121 bp overlap
ChIP K-562 GSE92879.CTCF.K-562 105 bp overlap
ChIP K-562 GSE70764.CTCF.K-562 68 bp overlap
ChIP K-562_Dox GSE92879.CTCF.K-562_Dox 121 bp overlap
ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 121 bp overlap
ChIP K-562_RabbitC GSE137216.CTCF.K-562_RabbitC 121 bp overlap
ChIP K-562_dCas9-KRAB GSE132212.CTCF.K-562_dCas9-KRAB 57 bp overlap
ChIP K-562_enCRISPRi-KL GSE132212.CTCF.K-562_enCRISPRi-KL 94 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.CTCF.K-562_enCRISPRi-LK 51 bp overlap
ChIP KARPAS422 ENCSR113REG.CTCF.KARPAS422 121 bp overlap
ChIP KMS-11 ENCFF853JKX 121 bp overlap
ChIP LNCaP-C4-2B ENCSR460LGH.CTCF.LNCaP-C4-2B 118 bp overlap
ChIP Loucy ENCSR464DKE.CTCF.Loucy 121 bp overlap
ChIP MCF-10AT1 GSE98551.CTCF.MCF-10AT1 63 bp overlap
ChIP MCF-7 ENCSR560BUE.CTCF.MCF-7 121 bp overlap
ChIP MCF-7 ENCSR000DWH.CTCF.MCF-7 121 bp overlap
ChIP MCF-7L_t0 GSE108787.CTCF.MCF-7L_t0 103 bp overlap
ChIP MCF-7L_t1 GSE108787.CTCF.MCF-7L_t1 84 bp overlap
ChIP MCF-7L_t24 GSE108787.CTCF.MCF-7L_t24 121 bp overlap
ChIP NCI-H929 ENCFF305JAB 89 bp overlap
ChIP NCI-H929 ENCSR634OAQ.CTCF.NCI-H929 92 bp overlap
ChIP OCI-Ly1 ENCSR072EUE.CTCF.OCI-Ly1 121 bp overlap
ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 121 bp overlap
ChIP OCI-Ly7 ENCSR027HML.CTCF.OCI-Ly7 121 bp overlap
ChIP PC-3 ENCSR359LOD.CTCF.PC-3 86 bp overlap
ChIP Panc1 ENCFF056JQX 121 bp overlap
ChIP RH4 GSE83726.CTCF.RH4 121 bp overlap
ChIP RWPE-2 ENCSR856JJB.CTCF.RWPE-2 121 bp overlap
ChIP RWPE1 ENCFF200GQF 121 bp overlap
ChIP RWPE2 ENCFF911IEE 99 bp overlap
ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 121 bp overlap
ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 121 bp overlap
ChIP SLK_RAD21-KD GSE138105.CTCF.SLK_RAD21-KD 121 bp overlap
ChIP SU-DHL-6 ENCFF116KKR 96 bp overlap
ChIP T-47D GSE111923.CTCF.T-47D 121 bp overlap
ChIP T-47D_NaCl-7-5min GSE111923.CTCF.T-47D_NaCl-7-5min 113 bp overlap
ChIP T-47D_NaCl-isotonic-triptolide GSE111923.CTCF.T-47D_NaCl-isotonic-triptolide 58 bp overlap
ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 90 bp overlap
ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 111 bp overlap
ChIP VCaP ENCFF858YQT 106 bp overlap
ChIP WTC11 ENCFF658QVH 81 bp overlap
ChIP activated CD4-positive, alpha-beta T cell ENCFF095PZX 121 bp overlap
ChIP astrocyte ENCFF558APA 55 bp overlap
ChIP brain ENCFF163BBN 118 bp overlap
ChIP brain ENCFF685VRG 72 bp overlap
ChIP chondrocyte ENCFF134ORZ 62 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF277YTN 72 bp overlap
ChIP dorsolateral prefrontal cortex ENCFF631JNO 121 bp overlap
ChIP hESC_D0 GSE116862.CTCF.hESC_D0 55 bp overlap
ChIP hESC_D5 GSE116862.CTCF.hESC_D5 121 bp overlap
ChIP hESC_NAIVE GSE69646.CTCF.hESC_NAIVE 74 bp overlap
ChIP heart left ventricle ENCFF888ERQ 80 bp overlap
ChIP hiPSC GSE115407.CTCF.hiPSC 121 bp overlap
ChIP keratinocyte GSE154221.CTCF.keratinocyte 121 bp overlap
ChIP keratinocyte ENCSR000ALJ.CTCF.keratinocyte 73 bp overlap
ChIP leukemia_CEBPA-24h GSE142161.CTCF.leukemia_CEBPA-24h 50 bp overlap
ChIP lymphoblast_mut GSE155324.CTCF.lymphoblast_mut 121 bp overlap
ChIP mesothelial cell of epicardium ENCFF427RFE 108 bp overlap
ChIP nephron ENCFF589HXU 98 bp overlap
ChIP nephron ENCFF972IQB 101 bp overlap
ChIP nephron progenitor cell ENCFF455DMI 70 bp overlap
ChIP neural progenitor cell ENCFF581WPG 99 bp overlap
ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 73 bp overlap
ChIP prostate_epithelial ENCSR196HOM.CTCF.prostate_epithelial 90 bp overlap
ChIP transverse colon ENCFF046SHF 92 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 121 bp overlap
ESR1 9 datasets
ChIP MCF-7 GSE119057.ESR1.MCF-7 57 bp overlap
ChIP MCF-7_ER_t10 GSE119057.ESR1.MCF-7_ER_t10 113 bp overlap
ChIP MCF-7_ER_t20 GSE119057.ESR1.MCF-7_ER_t20 55 bp overlap
ChIP MCF-7_ER_t30 GSE119057.ESR1.MCF-7_ER_t30 115 bp overlap
ChIP MCF-7_ER_t40 GSE119057.ESR1.MCF-7_ER_t40 103 bp overlap
ChIP MCF-7_ER_t50 GSE119057.ESR1.MCF-7_ER_t50 51 bp overlap
ChIP MCF-7_ER_t70 GSE119057.ESR1.MCF-7_ER_t70 56 bp overlap
ChIP MCF-7_ER_t80 GSE119057.ESR1.MCF-7_ER_t80 115 bp overlap
ChIP MCF-7_ER_t90 GSE119057.ESR1.MCF-7_ER_t90 53 bp overlap
GMEB1 1 dataset
ChIP K-562 ENCSR928KOR.GMEB1.K-562 79 bp overlap
HDAC2 2 datasets
ChIP K-562 ENCSR893WSB.HDAC2.K-562 93 bp overlap
ChIP K-562 ENCSR075HTM.HDAC2.K-562 52 bp overlap
KDM1A 1 dataset
ChIP K-562 ENCSR908CMW.KDM1A.K-562 57 bp overlap
LDB1 1 dataset
ChIP K-562 GSE142227.LDB1.K-562 86 bp overlap
NCOR1 1 dataset
ChIP K-562 ENCSR910JAI.NCOR1.K-562 67 bp overlap
RAD21 6 datasets
ChIP A549 ENCFF264AHX 60 bp overlap
ChIP HAP1_CTCF GSE126634.RAD21.HAP1_CTCF 60 bp overlap
ChIP HCT-116 GSE131606.RAD21.HCT-116 121 bp overlap
ChIP HCT-116 GSE121355.RAD21.HCT-116 112 bp overlap
ChIP HCT-116_RAD21-mAC GSE104888.RAD21.HCT-116_RAD21-mAC 78 bp overlap
ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 58 bp overlap
SMC1 4 datasets
ChIP DKO GSE131606.SMC1.DKO 121 bp overlap
ChIP HAP1_WaplKO-33_SCC4KO GSE94992.SMC1.HAP1_WaplKO-33_SCC4KO 110 bp overlap
ChIP HCAEC GSE101921.SMC1.HCAEC 92 bp overlap
ChIP HCT-116 GSE131606.SMC1.HCT-116 121 bp overlap
SMC1A 1 dataset
ChIP MCF-7 GSE76893.SMC1A.MCF-7 57 bp overlap
SMC3 6 datasets
ChIP GP5D GSE51234.SMC3.GP5D 100 bp overlap
ChIP HeLa GSE126990.SMC3.HeLa 59 bp overlap
ChIP HeLa-Kyoto GSE102884.SMC3.HeLa-Kyoto 59 bp overlap
ChIP HeLa-Kyoto GSE138405.SMC3.HeLa-Kyoto 59 bp overlap
ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 56 bp overlap
ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 94 bp overlap
STAG1 2 datasets
ChIP HeLa GSE126990.STAG1.HeLa 61 bp overlap
ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 61 bp overlap
TAL1 5 datasets
ChIP K-562 GSE107726.TAL1.K-562 121 bp overlap
ChIP K-562 ENCSR000EHB.TAL1.K-562 76 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.TAL1.K-562_enCRISPRi-LK 72 bp overlap
ChIP K-562_sgGal4 GSE132212.TAL1.K-562_sgGal4 119 bp overlap
ChIP K562 ENCFF661CCK 121 bp overlap
TCF3 1 dataset
ChIP K-562 ENCSR970OJY.TCF3.K-562 71 bp overlap
TEAD4 1 dataset
ChIP K562 ENCFF673NIK 103 bp overlap
XRCC5 2 datasets
ChIP HepG2 ENCFF330PDO 58 bp overlap
ChIP HepG2 ENCFF680LVJ 61 bp overlap
ZMYM4 1 dataset
ChIP HepG2 ENCFF567SQY 88 bp overlap
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