Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

28 transcription factors

AR 1 dataset

ChIP MCF-7 GSE48930.AR.MCF-7 225 bp overlap

BRF1 1 dataset

ChIP H9_Activin GSE94418.BRF1.H9_Activin 148 bp overlap

CDX2 3 datasets

ChIP LS180 GSE31939.CDX2.LS180 415 bp overlap

ChIP LS180_125 GSE31939.CDX2.LS180_125 411 bp overlap

ChIP intestinal-cell GSE115314.CDX2.intestinal-cell 291 bp overlap

CTNNB1 3 datasets

ChIP LS180 GSE31939.CTNNB1.LS180 152 bp overlap

ChIP LS180_125 GSE31939.CTNNB1.LS180_125 213 bp overlap

ChIP hiPSC_D2 GSE132532.CTNNB1.hiPSC_D2 294 bp overlap

EOMES 1 dataset

ChIP hESC GSE26097.EOMES.hESC 399 bp overlap

EZH2_phosphoT487 1 dataset

ChIP hepatocyte ENCSR341VYI.EZH2_phosphoT487.hepatocyte 204 bp overlap

FOXA1 1 dataset

ChIP LS180 GSE140533.FOXA1.LS180 84 bp overlap

FOXA2 1 dataset

ChIP DE DE-FOXA2-1 275 bp overlap

GATA2 2 datasets

ChIP ESF GSE108408.GATA2.ESF 205 bp overlap

ChIP hiPSC_SLC6ebs GSE107639.GATA2.hiPSC_SLC6ebs 270 bp overlap

GATA4 4 datasets

ChIP DE DE-GATA4-1 336 bp overlap

ChIP DE DE-GATA4-2 415 bp overlap

ChIP KATO-III GSE51705.GATA4.KATO-III 208 bp overlap

ChIP foregut GSE117136.GATA4.foregut 278 bp overlap

GATA6 11 datasets

ChIP DE DE-GATA6-1 332 bp overlap

ChIP DE DE-GATA6-2 415 bp overlap

ChIP DE_D1 S09-DE-d1-GATA6-exp1 415 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 415 bp overlap

ChIP DE_D1 S41-DE-d1-GATA6-exp2 415 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 415 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 415 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 415 bp overlap

ChIP KATO-III GSE51705.GATA6.KATO-III 127 bp overlap

ChIP YCC-3 GSE51705.GATA6.YCC-3 415 bp overlap

ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 415 bp overlap

HNF4A 1 dataset

ChIP KATO-III GSE114018.HNF4A.KATO-III 160 bp overlap

NCOA2 1 dataset

ChIP MCF-7 ERP000901.NCOA2.MCF-7 133 bp overlap

NKX3-1 1 dataset

ChIP islet ERP004003.NKX3-1.islet 177 bp overlap

ONECUT2 1 dataset

ChIP A-549 GSE102599.ONECUT2.A-549 91 bp overlap

PDX1 2 datasets

ChIP hiPSC GSE125768.PDX1.hiPSC 225 bp overlap

ChIP islet ERP001456.PDX1.islet 188 bp overlap

RARA 1 dataset

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 244 bp overlap

REST 1 dataset

ChIP colorectal-cancer_shCTRL_intact GSE112555.REST.colorectal-cancer_shCTRL_intact 257 bp overlap

RXR 1 dataset

ChIP LS180 GSE31939.RXR.LS180 172 bp overlap

SIX2 3 datasets

ChIP HEK GSE73865.SIX2.HEK 379 bp overlap

ChIP kidney_fetal_16w GSE75948.SIX2.kidney_fetal_16w 233 bp overlap

ChIP kidney_fetal_17w GSE75948.SIX2.kidney_fetal_17w 381 bp overlap

SMAD2-3 3 datasets

ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 317 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 415 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 415 bp overlap

SMAD2_3 3 datasets

ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 415 bp overlap

ChIP DE_D1 S39-DE-d1-SMAD2_3-exp2 333 bp overlap

ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 415 bp overlap

SMARCC1 1 dataset

ChIP DE_D1 S15-DE-d1-BAF155-exp1 410 bp overlap

SOX17 1 dataset

ChIP DE_D2 DED2-SOX17_Batch_II 367 bp overlap

SOX17_M 1 dataset

ChIP DE_D2 DED2-SOX17-M_Batch_II 233 bp overlap

T 1 dataset

ChIP H9_MESODERM GSE60606.T.H9_MESODERM 333 bp overlap

TCF4 1 dataset

ChIP LS180 GSE31939.TCF4.LS180 128 bp overlap

ZNF440 1 dataset

ChIP HEK293T GSE78099.ZNF440.HEK293T 153 bp overlap

Genome Browser