chr8 : 109,650,984 109,651,222
238 bp 15 TFs 2 linked genes
This 238 bp open chromatin element is linked to SYBU and SYBU-AS1 and is bound by 15 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SYBU 6.2 kb Proximal Proximity
SYBU-AS1 6.9 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr8:109,645,984 – 109,656,222
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
15 transcription factors
Source
Cell type
BRD3 1 dataset
ChIP HUVEC-C_MS417 GSE60171.BRD3.HUVEC-C_MS417 60 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 148 bp overlap
CHD8 1 dataset
ChIP T-47D GSE62428.CHD8.T-47D 69 bp overlap
FOXA1 1 dataset
ChIP breast-cancer_ENOB-2848 GSE128018.FOXA1.breast-cancer_ENOB-2848 188 bp overlap
GATA1 3 datasets
ChIP K-562 GSE107726.GATA1.K-562 185 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 180 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 193 bp overlap
GATA2 8 datasets
ChIP SH-SY5Y ENCFF485YIB 238 bp overlap
ChIP SH-SY5Y ENCSR000EYB.GATA2.SH-SY5Y 238 bp overlap
ChIP SK-N-SH ENCFF764OZD 238 bp overlap
ChIP SK-N-SH ENCFF764OZD 198 bp overlap
ChIP SK-N-SH ENCSR706VOO.GATA2.SK-N-SH 195 bp overlap
ChIP VCaP GSE125236.GATA2.VCaP 107 bp overlap
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 168 bp overlap
ChIP dermal-fibroblast_alone GSE51025.GATA2.dermal-fibroblast_alone 98 bp overlap
GATA3 7 datasets
ChIP BE2C GSE65664.GATA3.BE2C 195 bp overlap
ChIP MCF-7 ENCFF352QVM 238 bp overlap
ChIP MCF-7 GSE133072.GATA3.MCF-7 204 bp overlap
ChIP SH-SY5Y ENCFF475HYF 238 bp overlap
ChIP SH-SY5Y ENCSR000EXZ.GATA3.SH-SY5Y 238 bp overlap
ChIP SK-N-BE2-C GSE94822.GATA3.SK-N-BE2-C 132 bp overlap
ChIP T-47D ENCSR000BMX.GATA3.T-47D 142 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 238 bp overlap
ChIP DE DE-GATA4-2 238 bp overlap
GATA6 5 datasets
ChIP DE DE-GATA6-1 209 bp overlap
ChIP DE DE-GATA6-2 238 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 238 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 238 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 238 bp overlap
SMARCA4 3 datasets
ChIP HS-SY-2_HA-tagged GSE108926.SMARCA4.HS-SY-2_HA-tagged 238 bp overlap
ChIP NGP GSE134626.SMARCA4.NGP 238 bp overlap
ChIP NGP_ARID1A-mut2 GSE134626.SMARCA4.NGP_ARID1A-mut2 231 bp overlap
STAT3 1 dataset
ChIP breast-cancer_3487 GSE126004.STAT3.breast-cancer_3487 210 bp overlap
TAL1 2 datasets
ChIP K-562_enCRISPRi-KL GSE132212.TAL1.K-562_enCRISPRi-KL 185 bp overlap
ChIP ProEs GSE59087.TAL1.ProEs 151 bp overlap
TRPS1 1 dataset
ChIP MCF-7 GSE133072.TRPS1.MCF-7 197 bp overlap