Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

27 transcription factors

ARID1A 1 dataset

ChIP HAP1 GSE108387.ARID1A.HAP1 278 bp overlap

BAP1 1 dataset

ChIP NCI-H1963_shNONT GSE145028.BAP1.NCI-H1963_shNONT 296 bp overlap

BMI1 1 dataset

ChIP MCF-7 ENCSR966YYJ.BMI1.MCF-7 218 bp overlap

BRD4 5 datasets

ChIP NCI-H1963_shNONT GSE145028.BRD4.NCI-H1963_shNONT 296 bp overlap

ChIP cortical-interneuron_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_KCl-pos_JQ1-neg 296 bp overlap

ChIP cortical-interneuron_R133C_KCl-neg_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-neg_JQ1-neg 296 bp overlap

ChIP cortical-interneuron_R133C_KCl-pos_JQ1-neg GSE117508.BRD4.cortical-interneuron_R133C_KCl-pos_JQ1-neg 242 bp overlap

ChIP retina_AB1-FW15 GSE86981.BRD4.retina_AB1-FW15 141 bp overlap

CHD7 1 dataset

ChIP hiPSC_derived_lt-NES GSE108506.CHD7.hiPSC_derived_lt-NES 229 bp overlap

COMMD3-BMI1,BMI1 1 dataset

ChIP MCF-7 ENCFF570JPP 221 bp overlap

EZH2_phosphoT487 2 datasets

ChIP PC-9 ENCSR702GMW.EZH2_phosphoT487.PC-9 89 bp overlap

ChIP SK-N-SH ENCSR297MUV.EZH2_phosphoT487.SK-N-SH 239 bp overlap

FEZF1 1 dataset

ChIP HEK293 ENCSR827NWO.FEZF1.HEK293 61 bp overlap

GATA2 2 datasets

ChIP LNCaP GSE38391.GATA2.LNCaP 159 bp overlap

ChIP LNCaP GSE52725.GATA2.LNCaP 159 bp overlap

NANOG 3 datasets

ChIP HUES-8 GSE109524.NANOG.HUES-8 296 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 169 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 296 bp overlap

NEUROD1 3 datasets

ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 296 bp overlap

ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 290 bp overlap

ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 296 bp overlap

OSR2 1 dataset

ChIP HEK293 ENCSR324LTM.OSR2.HEK293 97 bp overlap

PHIP 1 dataset

ChIP HEK293_ab833 GSE101646.PHIP.HEK293_ab833 262 bp overlap

POU5F1 1 dataset

ChIP HUES-8 GSE109524.POU5F1.HUES-8 77 bp overlap

PRDM6 2 datasets

ChIP HEK293 ENCFF283AJL 81 bp overlap

ChIP HEK293 ENCSR892QHR.PRDM6.HEK293 167 bp overlap

RARA 2 datasets

ChIP hiPSC_D3 GSE109172.RARA.hiPSC_D3 296 bp overlap

ChIP hiPSC_D4 GSE109172.RARA.hiPSC_D4 296 bp overlap

RELA 1 dataset

ChIP aortic-endothelial-cell_IL1B_D49 GSE139377.RELA.aortic-endothelial-cell_IL1B_D49 188 bp overlap

RFX1 9 datasets

ChIP K-562 ENCSR968GIB.RFX1.K-562 262 bp overlap

ChIP K-562 ENCSR041AXL.RFX1.K-562 250 bp overlap

ChIP K562 ENCFF421AVO 205 bp overlap

ChIP K562 ENCFF421AVO 71 bp overlap

ChIP K562 ENCFF809XVG 179 bp overlap

ChIP MCF-7 ENCFF782EZS 94 bp overlap

ChIP MCF-7 ENCFF973QAD 198 bp overlap

ChIP MCF-7 ENCSR788XNX.RFX1.MCF-7 270 bp overlap

ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 254 bp overlap

SALL3 1 dataset

ChIP hiPSC GSE104863.SALL3.hiPSC 201 bp overlap

SMARCA4 4 datasets

ChIP NPC_siCT GSE122631.SMARCA4.NPC_siCT 231 bp overlap

ChIP NPC_siSOX GSE122631.SMARCA4.NPC_siSOX 182 bp overlap

ChIP NSC GSE125033.SMARCA4.NSC 296 bp overlap

ChIP hiPSC GSE124903.SMARCA4.hiPSC 296 bp overlap

SMARCC1 1 dataset

ChIP HS-SY-2 GSE108025.SMARCC1.HS-SY-2 296 bp overlap

SOX10 1 dataset

Motif DE_12h DE_12h-SOX10_MA0442.3 6 bp overlap

SOX4 1 dataset

Motif DE_12h DE_12h-SOX4_MA0867.3 8 bp overlap

SS18 2 datasets

ChIP SYO-1 GSE108025.SS18.SYO-1 296 bp overlap

ChIP SYO-1_shCt GSE139053.SS18.SYO-1_shCt 296 bp overlap

Smad4 1 dataset

Motif DE_12h DE_12h-Smad4_MA1153.2 7 bp overlap

ZNF335 1 dataset

ChIP HEK293 ENCSR328SUD.ZNF335.HEK293 241 bp overlap

ZSCAN16 1 dataset

ChIP HEK293 GSE76494.ZSCAN16.HEK293 232 bp overlap

Genome Browser