chr1 : 161,365,320 161,365,572
252 bp 22 TFs 3 linked genes
This 252 bp open chromatin element is linked to ENSG00000289106, CFAP126, and ENSG00000288670 and is bound by 22 transcription factors.
Linked Genes
3 genes
Gene Expression Dist. to TSS Distance Link type
ENSG00000289106 1.1 kb Proximal Proximity
CFAP126 2.3 kb Proximal Proximity
ENSG00000288670 2.4 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:161,360,320 – 161,370,572
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
22 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP IMR-90_QUIES GSE74238.BRD4.IMR-90_QUIES 69 bp overlap
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 151 bp overlap
EOMES 1 dataset
ChIP hESC GSE26097.EOMES.hESC 238 bp overlap
ESR1 1 dataset
ChIP T-47D_JC4727 GSE126004.ESR1.T-47D_JC4727 50 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 252 bp overlap
GATA1 3 datasets
ChIP HUDEP-2_30min GSE104676.GATA1.HUDEP-2_30min 118 bp overlap
ChIP K-562_dCas9-LSD1 GSE132212.GATA1.K-562_dCas9-LSD1 155 bp overlap
ChIP K-562_enCRISPRi-LK GSE132212.GATA1.K-562_enCRISPRi-LK 208 bp overlap
GATA4 3 datasets
ChIP DE DE-GATA4-1 252 bp overlap
ChIP DE DE-GATA4-2 252 bp overlap
ChIP foregut GSE117136.GATA4.foregut 220 bp overlap
GATA6 10 datasets
ChIP DE DE-GATA6-1 252 bp overlap
ChIP DE DE-GATA6-2 252 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 252 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 252 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 252 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 252 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 252 bp overlap
ChIP foregut GSE117136.GATA6.foregut 252 bp overlap
GLIS1 1 dataset
ChIP HEK293 ENCSR482BBZ.GLIS1.HEK293 212 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 252 bp overlap
ChIP K562 ENCFF055GAZ 252 bp overlap
ChIP K562 ENCFF317JJX 252 bp overlap
JUN 3 datasets
ChIP DE_D2 S02-DE-d2-JUN-exp1 252 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.JUN.HUES-8_DE_ctrl 209 bp overlap
ChIP Karpas-299 GSE151413.JUN.Karpas-299 118 bp overlap
MEIS2 1 dataset
ChIP K-562 ENCSR851BNE.MEIS2.K-562 166 bp overlap
NANOG 1 dataset
ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 184 bp overlap
RARA 1 dataset
ChIP hiPSC_D2 GSE132532.RARA.hiPSC_D2 180 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 252 bp overlap
SMAD2_3 2 datasets
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 252 bp overlap
ChIP DE_D2 S53-DE-d2-SMAD2_3-exp2 252 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 248 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 252 bp overlap
T 1 dataset
ChIP H9_ENDODERM GSE60606.T.H9_ENDODERM 183 bp overlap
ZBTB7A 1 dataset
ChIP HUDEP-2 GSE103445.ZBTB7A.HUDEP-2 252 bp overlap
ZNF281 1 dataset
ChIP K562 ENCFF594VNM 233 bp overlap
ZNF467 1 dataset
ChIP HEK293 GSE76494.ZNF467.HEK293 119 bp overlap