chr1 : 117,782,114 117,782,612
498 bp 27 TFs 0 linked genes
This 498 bp open chromatin element has no linked target genes and is bound by 27 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:117,777,114 – 117,787,612
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
27 transcription factors
Source
Cell type
BRD4 2 datasets
ChIP Kelly_sensitive GSE103030.BRD4.Kelly_sensitive 275 bp overlap
ChIP RH4_shCHD4 GSE140115.BRD4.RH4_shCHD4 194 bp overlap
ESR1 6 datasets
ChIP MCF-7_E2+4OHT_SRC-3 GSE119702.ESR1.MCF-7_E2+4OHT_SRC-3 376 bp overlap
ChIP MCF-7_SRC3_OHT GSE119702.ESR1.MCF-7_SRC3_OHT 376 bp overlap
ChIP MCF-7_shFbxo GSE119702.ESR1.MCF-7_shFbxo 141 bp overlap
ChIP MCF-7_shFbxo_E2 GSE119702.ESR1.MCF-7_shFbxo_E2 141 bp overlap
ChIP MCF-7_shFbxo_E2_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_E2_SRC-3 371 bp overlap
ChIP MCF-7_shFbxo_SRC-3 GSE119702.ESR1.MCF-7_shFbxo_SRC-3 371 bp overlap
ESRRG 1 dataset
ChIP cardiomyocyte GSE113760.ESRRG.cardiomyocyte 169 bp overlap
FOXA1 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA1.pancreatic-progenitor_PP1 498 bp overlap
FOXA2 3 datasets
ChIP DE DE-FOXA2-1 411 bp overlap
ChIP DE DE-FOXA2-2 400 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.FOXA2.pancreatic-progenitor_PP1 314 bp overlap
FOXO1-PAX3 2 datasets
ChIP RH4_DMSO-6H GSE116344.FOXO1-PAX3.RH4_DMSO-6H 197 bp overlap
ChIP RH4_Entinostat-6H GSE116344.FOXO1-PAX3.RH4_Entinostat-6H 170 bp overlap
GATA3 2 datasets
ChIP Kelly GSE94822.GATA3.Kelly 166 bp overlap
ChIP Kelly GSE65664.GATA3.Kelly 161 bp overlap
GATA4 6 datasets
ChIP DE DE-GATA4-1 498 bp overlap
ChIP DE DE-GATA4-2 498 bp overlap
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 164 bp overlap
ChIP foregut GSE117136.GATA4.foregut 498 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 498 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 391 bp overlap
ChIP DE DE-GATA6-2 498 bp overlap
ChIP foregut GSE117136.GATA6.foregut 498 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 498 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 441 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 498 bp overlap
HAND2 1 dataset
ChIP Kelly GSE94822.HAND2.Kelly 229 bp overlap
HDAC3 1 dataset
ChIP RH4_DMSO-6H GSE116344.HDAC3.RH4_DMSO-6H 230 bp overlap
HMBOX1 3 datasets
ChIP K-562 ENCSR757IIU.HMBOX1.K-562 248 bp overlap
ChIP K562 ENCFF055GAZ 387 bp overlap
ChIP K562 ENCFF317JJX 382 bp overlap
KDM1A 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.KDM1A.pancreatic-progenitor_PP1 300 bp overlap
MED12 1 dataset
ChIP leiomyoma_PT1063 GSE128230.MED12.leiomyoma_PT1063 77 bp overlap
MYCN 3 datasets
ChIP Kelly GSE94822.MYCN.Kelly 265 bp overlap
ChIP Kelly_sensitive GSE115249.MYCN.Kelly_sensitive 257 bp overlap
ChIP RH4 GSE83726.MYCN.RH4 220 bp overlap
MYOG 1 dataset
ChIP RH4 GSE83726.MYOG.RH4 310 bp overlap
NEUROD1 1 dataset
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 309 bp overlap
PDX1 3 datasets
ChIP hiPSC GSE125768.PDX1.hiPSC 120 bp overlap
ChIP hiPSC_derived_PPs GSE106949.PDX1.hiPSC_derived_PPs 152 bp overlap
ChIP pancreatic-progenitor GSE117136.PDX1.pancreatic-progenitor 188 bp overlap
RFX1 1 dataset
ChIP MCF-7 ENCSR066TET.RFX1.MCF-7 312 bp overlap
RXR 1 dataset
ChIP pancreatic-progenitor_PP1 GSE104840.RXR.pancreatic-progenitor_PP1 222 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 352 bp overlap
TBX2 1 dataset
ChIP Kelly GSE94822.TBX2.Kelly 272 bp overlap
TFAP2A 1 dataset
ChIP WA09 GSE105081.TFAP2A.WA09 377 bp overlap
TFAP2C 1 dataset
ChIP WA09 GSE105081.TFAP2C.WA09 213 bp overlap
USF1 1 dataset
ChIP WA01 ENCSR000BIU.USF1.WA01 175 bp overlap
ZNF563 1 dataset
ChIP HEK293 GSE76494.ZNF563.HEK293 145 bp overlap
ZNF667 1 dataset
ChIP HEK293 GSE76494.ZNF667.HEK293 145 bp overlap