chr1 : 112,950,561 112,950,774
213 bp 17 TFs 2 linked genes
This 213 bp open chromatin element is linked to SLC16A1 and SLC16A1-AS1 and is bound by 17 transcription factors.
Linked Genes
2 genes
Gene Expression Dist. to TSS Distance Link type
SLC16A1 5.4 kb Proximal Proximity
SLC16A1-AS1 5.6 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:112,945,561 – 112,955,774
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
17 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 213 bp overlap
ARNTL 1 dataset
ChIP U2OS_trough_DMOG GSE85096.ARNTL.U2OS_trough_DMOG 167 bp overlap
BRD4 1 dataset
ChIP HEK293_Ctrl GSE129407.BRD4.HEK293_Ctrl 142 bp overlap
CDK6 1 dataset
ChIP KB_IL GSE52469.CDK6.KB_IL 100 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 111 bp overlap
GATA2 1 dataset
ChIP K-562 ENCSR000DKA.GATA2.K-562 163 bp overlap
GATA4 1 dataset
ChIP Hep-G2 GSE135714.GATA4.Hep-G2 60 bp overlap
GATA6 7 datasets
ChIP AGS GSE51705.GATA6.AGS 146 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 213 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 204 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 213 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 198 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 205 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 179 bp overlap
IRF4 1 dataset
ChIP NCI-H929 GSE56857.IRF4.NCI-H929 85 bp overlap
MYOD1 1 dataset
ChIP rhabdomyosarcoma GSE50413.MYOD1.rhabdomyosarcoma 153 bp overlap
POLR2A 1 dataset
ChIP H1 ENCFF833NJP 213 bp overlap
PPARG 1 dataset
ChIP HUVEC-C_DMSO_HYPO GSE50144.PPARG.HUVEC-C_DMSO_HYPO 107 bp overlap
RB1 1 dataset
ChIP GM12878 ENCSR785OKZ.RB1.GM12878 105 bp overlap
RBFOX2 1 dataset
ChIP K-562 GSE120104.RBFOX2.K-562 126 bp overlap
SSRP1 1 dataset
ChIP HT-1080_AclacinomycinA GSE107595.SSRP1.HT-1080_AclacinomycinA 213 bp overlap
ZEB2 1 dataset
ChIP HEK293 ENCSR417VWF.ZEB2.HEK293 202 bp overlap