Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

13 transcription factors

CTCF 62 datasets

ChIP Caco-2 ENCSR000DQN.CTCF.Caco-2 145 bp overlap

ChIP GM04648 GSE148179.CTCF.GM04648 130 bp overlap

ChIP GM23338 ENCFF772DML 163 bp overlap

ChIP H1 ENCFF764RHO 163 bp overlap

ChIP H9 ENCFF152GTF 163 bp overlap

ChIP HAP1 GSE152721.CTCF.HAP1 148 bp overlap

ChIP HAP1_WT GSE126634.CTCF.HAP1_WT 148 bp overlap

ChIP HAP1_WaplKO-33 GSE94992.CTCF.HAP1_WaplKO-33 152 bp overlap

ChIP HAP1_clone21_TSS-CRISPR GSE152721.CTCF.HAP1_clone21_TSS-CRISPR 153 bp overlap

ChIP HEC-1-B_WT GSE140868.CTCF.HEC-1-B_WT 125 bp overlap

ChIP HEK293 ENCSR000DTW.CTCF.HEK293 103 bp overlap

ChIP HeLa-Kyoto_PDS5-depleted GSE102884.CTCF.HeLa-Kyoto_PDS5-depleted 163 bp overlap

ChIP HeLa-Kyoto_WAPL-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL-depleted 163 bp overlap

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.CTCF.HeLa-Kyoto_WAPL_PDS-depleted 159 bp overlap

ChIP HeLa-S3 ENCSR000AOA.CTCF.HeLa-S3 138 bp overlap

ChIP HeLa-S3_shCtrl GSE137848.CTCF.HeLa-S3_shCtrl 163 bp overlap

ChIP HeLa_dC9Sun-D3AMut_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3AMut_MIR152 141 bp overlap

ChIP HeLa_dC9Sun-D3A_CDCC85C GSE107607.CTCF.HeLa_dC9Sun-D3A_CDCC85C 149 bp overlap

ChIP HeLa_dC9Sun-D3A_MIR152 GSE107607.CTCF.HeLa_dC9Sun-D3A_MIR152 163 bp overlap

ChIP HeLa_dC9Sun-D3A_SHB GSE107607.CTCF.HeLa_dC9Sun-D3A_SHB 139 bp overlap

ChIP Hep-G2 ENCSR000BIE.CTCF.Hep-G2 94 bp overlap

ChIP ID00015 GSE76922.CTCF.ID00015 163 bp overlap

ChIP K-562 ENCSR000AKO.CTCF.K-562 140 bp overlap

ChIP K-562_5635 GSE131349.CTCF.K-562_5635 93 bp overlap

ChIP K-562_MonoC GSE137216.CTCF.K-562_MonoC 54 bp overlap

ChIP K-562_RF2-insertion GSE140868.CTCF.K-562_RF2-insertion 81 bp overlap

ChIP K-562_WT GSE140868.CTCF.K-562_WT 127 bp overlap

ChIP K-562_dCas9-LSD1 GSE132212.CTCF.K-562_dCas9-LSD1 75 bp overlap

ChIP K562 ENCFF082GOI 163 bp overlap

ChIP K562 ENCFF111MGE 163 bp overlap

ChIP LNCaP clone FGC ENCFF957KCI 158 bp overlap

ChIP NB69 GSE101295.CTCF.NB69 124 bp overlap

ChIP OCI-Ly3 ENCSR756ZKG.CTCF.OCI-Ly3 149 bp overlap

ChIP SK-MEL-147 GSE94488.CTCF.SK-MEL-147 144 bp overlap

ChIP SK-N-AS GSE101295.CTCF.SK-N-AS 163 bp overlap

ChIP SK-N-SH ENCSR541AMF.CTCF.SK-N-SH 163 bp overlap

ChIP SLK_Ctrl GSE138105.CTCF.SLK_Ctrl 163 bp overlap

ChIP THP-1_Pam3csk-000m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-000m 163 bp overlap

ChIP THP-1_Pam3csk-000m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-000m-Flavo-240m 141 bp overlap

ChIP THP-1_Pam3csk-025m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-025m-Flavo-000m 163 bp overlap

ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-030m-Flavo-000m 133 bp overlap

ChIP THP-1_Pam3csk-045m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-045m-Flavo-000m 163 bp overlap

ChIP THP-1_Pam3csk-060m-Flavo-000m GSE103477.CTCF.THP-1_Pam3csk-060m-Flavo-000m 100 bp overlap

ChIP THP-1_Pam3csk-150m-Flavo-030m GSE103477.CTCF.THP-1_Pam3csk-150m-Flavo-030m 163 bp overlap

ChIP THP-1_Pam3csk-360m-Flavo-240m GSE103477.CTCF.THP-1_Pam3csk-360m-Flavo-240m 163 bp overlap

ChIP THP-1_macrophage_PMA GSE96800.CTCF.THP-1_macrophage_PMA 163 bp overlap

ChIP THP-1_siCtrl-eGFP-Pam3csk-0h GSE103477.CTCF.THP-1_siCtrl-eGFP-Pam3csk-0h 102 bp overlap

ChIP WA01 ENCSR000BNH.CTCF.WA01 121 bp overlap

ChIP WA01_MESEN_STEM GSE52457.CTCF.WA01_MESEN_STEM 124 bp overlap

ChIP WA01_NEUR GSE52457.CTCF.WA01_NEUR 163 bp overlap

ChIP astrocyte_spinal_cord ENCSR000DSU.CTCF.astrocyte_spinal_cord 111 bp overlap

ChIP endodermal cell ENCFF471YCZ 163 bp overlap

ChIP endothelial_brain-microvascular ENCSR000DTA.CTCF.endothelial_brain-microvascular 133 bp overlap

ChIP epithelial_proximal_tubule ENCSR000DXD.CTCF.epithelial_proximal_tubule 163 bp overlap

ChIP fibroblast of lung ENCFF505HVQ 163 bp overlap

ChIP fibroblast of pulmonary artery ENCFF742RSV 163 bp overlap

ChIP hiPSC_CVI GSE106870.CTCF.hiPSC_CVI 150 bp overlap

ChIP hiPSC_IB12 GSE106870.CTCF.hiPSC_IB12 152 bp overlap

ChIP hiPSC_IV8 GSE106870.CTCF.hiPSC_IV8 163 bp overlap

ChIP hiPSC_parental-line GSE106870.CTCF.hiPSC_parental-line 163 bp overlap

ChIP neural progenitor cell ENCFF420RBO 119 bp overlap

ChIP neural_progenitor ENCSR125NBL.CTCF.neural_progenitor 163 bp overlap

CTCFL 1 dataset

ChIP K-562 ENCSR000BNK.CTCFL.K-562 84 bp overlap

Cebpa 1 dataset

ChIP BLaER1 ENCFF364PUR 85 bp overlap

NR1D2 1 dataset

Motif DE_12h DE_12h-NR1D2_MA1532.2 15 bp overlap

Nr1h3::Rxra 1 dataset

Motif DE_12h DE_12h-Nr1h3Rxra_MA0494.2 16 bp overlap

RAD21 9 datasets

ChIP H1 ENCFF698EWO 163 bp overlap

ChIP H1 ENCFF967OJF 163 bp overlap

ChIP K-562 ENCSR000BKV.RAD21.K-562 113 bp overlap

ChIP K-562_RF2-insertion GSE140868.RAD21.K-562_RF2-insertion 90 bp overlap

ChIP SLK_Ctrl GSE138105.RAD21.SLK_Ctrl 163 bp overlap

ChIP THP-1_Pam3csk-030m-Flavo-000m GSE103477.RAD21.THP-1_Pam3csk-030m-Flavo-000m 141 bp overlap

ChIP hiPSC_IB12 GSE106870.RAD21.hiPSC_IB12 115 bp overlap

ChIP hiPSC_IIIB12 GSE106870.RAD21.hiPSC_IIIB12 163 bp overlap

ChIP hiPSC_parental-line GSE106870.RAD21.hiPSC_parental-line 127 bp overlap

Runx1 1 dataset

Motif DE_12h DE_12h-Runx1_MA0002.3 9 bp overlap

SMC3 2 datasets

ChIP HeLa-Kyoto_PDS5-depleted GSE102884.SMC3.HeLa-Kyoto_PDS5-depleted 163 bp overlap

ChIP HeLa-Kyoto_WAPL_PDS-depleted GSE102884.SMC3.HeLa-Kyoto_WAPL_PDS-depleted 163 bp overlap

SREBF1 1 dataset

Motif DE_12h DE_12h-SREBF1_MA0595.1 10 bp overlap

SREBF2 1 dataset

Motif DE_12h DE_12h-SREBF2_MA0596.1 10 bp overlap

STAG1 2 datasets

ChIP HeLa GSE126990.STAG1.HeLa 163 bp overlap

ChIP HeLa-Kyoto GSE138405.STAG1.HeLa-Kyoto 163 bp overlap

ZNF362 1 dataset

ChIP HepG2 ENCFF256AZN 163 bp overlap

ZNF384 5 datasets

ChIP HEK293T ENCSR882ICT.ZNF384.HEK293T 163 bp overlap

ChIP Hep-G2 ENCSR101FJU.ZNF384.Hep-G2 163 bp overlap

ChIP HepG2 ENCFF129PLC 107 bp overlap

ChIP K-562 ENCSR000EFP.ZNF384.K-562 163 bp overlap

ChIP K562 ENCFF365NXQ 78 bp overlap

Genome Browser