chr5 : 180,350,789 180,351,026
237 bp 23 TFs 1 linked gene
This 237 bp open chromatin element is linked to GFPT2 and is bound by 23 transcription factors.
Linked Genes
1 gene
Gene Expression Dist. to TSS Distance Link type
GFPT2 2.3 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:180,345,789 – 180,356,026
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
ARID2 1 dataset
ChIP Aska-SS_shSSX GSE108025.ARID2.Aska-SS_shSSX 233 bp overlap
CHD1 1 dataset
ChIP WA01 ENCSR000AQK.CHD1.WA01 84 bp overlap
CTBP1 1 dataset
ChIP K-562 ENCSR201NQZ.CTBP1.K-562 237 bp overlap
FOXA2 1 dataset
ChIP DE DE-FOXA2-1 162 bp overlap
GATA1 1 dataset
ChIP K-562 GSE107726.GATA1.K-562 193 bp overlap
GATA4 5 datasets
ChIP DE DE-GATA4-1 237 bp overlap
ChIP DE DE-GATA4-2 237 bp overlap
ChIP foregut GSE117136.GATA4.foregut 237 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA4.pancreatic-progenitor 215 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA4.pancreatic-progenitor_PP1 237 bp overlap
GATA6 15 datasets
ChIP DE DE-GATA6-1 237 bp overlap
ChIP DE DE-GATA6-2 237 bp overlap
ChIP DE_D1 S09-DE-d1-GATA6-exp1 237 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 237 bp overlap
ChIP DE_D1 S41-DE-d1-GATA6-exp2 237 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 237 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 237 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 237 bp overlap
ChIP PATU8988 GSE47535.GATA6.PATU8988 175 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 237 bp overlap
ChIP foregut GSE117136.GATA6.foregut 237 bp overlap
ChIP foregut_KO GSE117136.GATA6.foregut_KO 237 bp overlap
ChIP pancreatic-progenitor GSE117136.GATA6.pancreatic-progenitor 237 bp overlap
ChIP pancreatic-progenitor_KO GSE117136.GATA6.pancreatic-progenitor_KO 237 bp overlap
ChIP pancreatic-progenitor_PP1 GSE104840.GATA6.pancreatic-progenitor_PP1 186 bp overlap
HNRNPLL 2 datasets
ChIP K-562 ENCSR112RNT.HNRNPLL.K-562 171 bp overlap
ChIP K-562 GSE120104.HNRNPLL.K-562 165 bp overlap
HSF1 2 datasets
ChIP HCT-116_A10_43 GSE152144.HSF1.HCT-116_A10_43 175 bp overlap
ChIP HCT-116_A8_43 GSE152144.HSF1.HCT-116_A8_43 169 bp overlap
MAFF 1 dataset
ChIP HeLa-S3 ENCSR140DSL.MAFF.HeLa-S3 56 bp overlap
MAFG 1 dataset
ChIP K-562 ENCSR818DQV.MAFG.K-562 114 bp overlap
MAFK 2 datasets
ChIP HepG2 ENCFF743ZOF 70 bp overlap
ChIP IMR-90 ENCFF336DHZ 74 bp overlap
MTF2 1 dataset
ChIP DU145_SH4 GSE135623.MTF2.DU145_SH4 179 bp overlap
NELFE 1 dataset
ChIP K-562_NHS GSE112379.NELFE.K-562_NHS 152 bp overlap
NR3C1 1 dataset
ChIP BEAS-2B_TNF_IA1 GSE125623.NR3C1.BEAS-2B_TNF_IA1 237 bp overlap
POU5F1 1 dataset
ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 174 bp overlap
SMAD2-3 3 datasets
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 237 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.SMAD2-3.HUES-8_DE_JNKi 237 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.SMAD2-3.HUES-8_DE_ctrl 237 bp overlap
SMAD2_3 3 datasets
ChIP DE_D1 S07-DE-d1-SMAD2_3-exp1 91 bp overlap
ChIP DE_D1 S12-DE-d1-SMAD2_3-exp1 207 bp overlap
ChIP DE_D2 S01-DE-d2-SMAD2_3-exp1 237 bp overlap
SMARCC1 1 dataset
ChIP DE_D1 S15-DE-d1-BAF155-exp1 237 bp overlap
SSRP1 1 dataset
ChIP HT-1080_AclacinomycinA GSE107595.SSRP1.HT-1080_AclacinomycinA 237 bp overlap
TBP 1 dataset
ChIP hESC_2h GSE122298.TBP.hESC_2h 237 bp overlap
ZNF273 1 dataset
ChIP HEK293T GSE78099.ZNF273.HEK293T 123 bp overlap
ZNF316 1 dataset
ChIP K562 ENCFF838QCD 139 bp overlap