chr1 : 102,056,026 102,056,463
437 bp 23 TFs 0 linked genes
This 437 bp open chromatin element has no linked target genes and is bound by 23 transcription factors.
Linked Genes
No linked genes
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr1:102,051,026 – 102,061,463
This element Other elements ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
23 transcription factors
Source
Cell type
AR 3 datasets
ChIP prostate-cancer GSE136128.AR.prostate-cancer 130 bp overlap
ChIP prostate-cancer_PDX_58 GSE130408.AR.prostate-cancer_PDX_58 95 bp overlap
ChIP prostate-cancer_PDX_78 GSE130408.AR.prostate-cancer_PDX_78 117 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 204 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 219 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 283 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 121 bp overlap
ESR1 1 dataset
ChIP MCF-7_Veh_sc GSE117569.ESR1.MCF-7_Veh_sc 241 bp overlap
FOXA1 1 dataset
ChIP LNCaP_ETOH24H GSE58428.FOXA1.LNCaP_ETOH24H 262 bp overlap
FOXA2 2 datasets
ChIP DE DE-FOXA2-1 437 bp overlap
ChIP DE DE-FOXA2-2 437 bp overlap
GATA2 1 dataset
ChIP VCaP_JQ1 GSE125236.GATA2.VCaP_JQ1 198 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 437 bp overlap
ChIP DE DE-GATA4-2 437 bp overlap
GATA6 4 datasets
ChIP DE DE-GATA6-1 351 bp overlap
ChIP DE DE-GATA6-2 437 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 437 bp overlap
ChIP endoderm_KO GSE117136.GATA6.endoderm_KO 258 bp overlap
HOXB13 2 datasets
ChIP prostate-cancer_PDX_167 GSE130408.HOXB13.prostate-cancer_PDX_167 145 bp overlap
ChIP prostate-cancer_PDX_70 GSE130408.HOXB13.prostate-cancer_PDX_70 109 bp overlap
NANOG 2 datasets
ChIP HUES-8 GSE109524.NANOG.HUES-8 87 bp overlap
ChIP WA09 GSE105028.NANOG.WA09 101 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 262 bp overlap
POU5F1 4 datasets
ChIP HUES-8 GSE109524.POU5F1.HUES-8 143 bp overlap
ChIP NCCIT GSE36134.POU5F1.NCCIT 106 bp overlap
ChIP NCCIT_SNF5 GSE36134.POU5F1.NCCIT_SNF5 171 bp overlap
ChIP hESC_PRIMED GSE69646.POU5F1.hESC_PRIMED 189 bp overlap
RAD21 1 dataset
ChIP HAP1 GSE152721.RAD21.HAP1 135 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 247 bp overlap
SMAD2-3 1 dataset
ChIP HUES-8_DE GSE109524.SMAD2-3.HUES-8_DE 393 bp overlap
SOX17 1 dataset
ChIP DE_D2 DED2-SOX17_Batch_II 437 bp overlap
SOX17_M 1 dataset
ChIP DE_D2 DED2-SOX17-M_Batch_II 378 bp overlap
SOX2 1 dataset
ChIP hiPSC GSE56567.SOX2.hiPSC 105 bp overlap
TLE3 1 dataset
ChIP LNCaP GSE94682.TLE3.LNCaP 120 bp overlap
ZNF317 1 dataset
ChIP WTC11 ENCFF537KXI 314 bp overlap