chr5 : 109,685,876 – 109,686,194
318 bp 14 TFs 1 linked gene
This 318 bp open chromatin element is linked to MAN2A1-DT and is bound by 14 transcription factors.
Linked Genes
1 gene
Gene↕ Expression Dist. to TSS↑ Distance↕ Link type↕
MAN2A1-DT 2.1 kb Proximal Proximity
Chromatin Accessibility

Genome Browser

Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

View limited to ±500 kb around this element.
For the full data, please see the UCSC track linked below.
chr5:109,680,876 – 109,691,194
This element Other elements Gene links ATAC-seq RNA-seq

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding
14 transcription factors
Source
Cell type
ASCL1 1 dataset
ChIP NCI-H82 GSE69394.ASCL1.NCI-H82 205 bp overlap
BRD4 1 dataset
ChIP Kelly_resistant GSE103030.BRD4.Kelly_resistant 204 bp overlap
CRX 3 datasets
ChIP retina_Hu20 GSE137311.CRX.retina_Hu20 305 bp overlap
ChIP retina_Hu3 GSE137311.CRX.retina_Hu3 252 bp overlap
ChIP retina_Hu6 GSE137311.CRX.retina_Hu6 318 bp overlap
DUX4 1 dataset
ChIP WA01 GSE94322.DUX4.WA01 296 bp overlap
GATA4 2 datasets
ChIP DE DE-GATA4-1 298 bp overlap
ChIP DE DE-GATA4-2 318 bp overlap
GATA6 6 datasets
ChIP DE DE-GATA6-1 243 bp overlap
ChIP DE DE-GATA6-2 318 bp overlap
ChIP DE_D1 S14-DE-d1-GATA6-exp1 248 bp overlap
ChIP DE_D2 S55-DE-d2-GATA6-exp2 185 bp overlap
ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 315 bp overlap
ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 294 bp overlap
MEF2D 1 dataset
ChIP retina_Hu25 GSE137311.MEF2D.retina_Hu25 222 bp overlap
MNT 4 datasets
ChIP Hep-G2 ENCSR261EDU.MNT.Hep-G2 266 bp overlap
ChIP HepG2 ENCFF701PYP 225 bp overlap
ChIP MCF-7 ENCFF144ZFZ 262 bp overlap
ChIP MCF-7 ENCSR663ZZZ.MNT.MCF-7 222 bp overlap
MYBL2 1 dataset
ChIP A-673 GSE119971.MYBL2.A-673 290 bp overlap
NEUROD1 5 datasets
ChIP D283-Med GSE92582.NEUROD1.D283-Med 261 bp overlap
ChIP D283-Med_shNEUROD1-1579 GSE92582.NEUROD1.D283-Med_shNEUROD1-1579 273 bp overlap
ChIP D341-Med_shGFP GSE92582.NEUROD1.D341-Med_shGFP 318 bp overlap
ChIP D341-Med_shNEUROD1-1154 GSE92582.NEUROD1.D341-Med_shNEUROD1-1154 219 bp overlap
ChIP D341-Med_shNEUROD1-1579 GSE92582.NEUROD1.D341-Med_shNEUROD1-1579 318 bp overlap
OTX2 1 dataset
ChIP retina_Hu7 GSE137311.OTX2.retina_Hu7 318 bp overlap
RORB 1 dataset
ChIP retina_Hu22 GSE137311.RORB.retina_Hu22 275 bp overlap
ZBTB40 1 dataset
ChIP MCF-7 ENCFF044DWL 151 bp overlap
ZNF548 2 datasets
ChIP HEK293 ENCFF762PDF 142 bp overlap
ChIP HEK293 ENCSR892ZTO.ZNF548.HEK293 111 bp overlap
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