Genomic view centred on this element. Tracks include ATAC-seq accessibility, RNA-seq expression, TF binding peaks, and element-to-gene loop arcs across the ESC → DE time course.

Transcription factors with ChIP-seq peak overlap or TOBIAS motif footprint evidence at this element.

TF Binding

37 transcription factors

BHLHE22 1 dataset

Motif ES_0h ES_0h-BHLHE22_MA1635.2 6 bp overlap

CDX2 1 dataset

ChIP LS180_125 GSE31939.CDX2.LS180_125 167 bp overlap

ELF3 2 datasets

ChIP PDAC GSE64557.ELF3.PDAC 296 bp overlap

ChIP PDAC_SHCTR GSE64557.ELF3.PDAC_SHCTR 314 bp overlap

ERG 1 dataset

ChIP aortic-endothelial-cell_D14 GSE139377.ERG.aortic-endothelial-cell_D14 151 bp overlap

ETV5::HOXA2 1 dataset

Motif ES_0h ES_0h-ETV5HOXA2_MA1948.2 12 bp overlap

FLI1::DRGX 1 dataset

Motif ES_0h ES_0h-FLI1DRGX_MA1949.2 14 bp overlap

FOXA1 1 dataset

ChIP CFPAC-1_FOXA2-KO GSE119930.FOXA1.CFPAC-1_FOXA2-KO 122 bp overlap

GATA6 7 datasets

ChIP AGS GSE51705.GATA6.AGS 194 bp overlap

ChIP DE DE-GATA6-1 198 bp overlap

ChIP DE_D1 S14-DE-d1-GATA6-exp1 179 bp overlap

ChIP DE_D2 S55-DE-d2-GATA6-exp2 271 bp overlap

ChIP HUES-8_DE_JNKi GSE109524.GATA6.HUES-8_DE_JNKi 305 bp overlap

ChIP HUES-8_DE_ctrl GSE109524.GATA6.HUES-8_DE_ctrl 170 bp overlap

ChIP HUG1N GSE51936.GATA6.HUG1N 115 bp overlap

HOXB2::ELK1 1 dataset

Motif ES_0h ES_0h-HOXB2ELK1_MA1957.1 14 bp overlap

JUN 1 dataset

ChIP HAEC_IL1b_4h GSE89970.JUN.HAEC_IL1b_4h 129 bp overlap

NANOG 7 datasets

ChIP GM23338 ENCSR061DGF.NANOG.GM23338 205 bp overlap

ChIP HUES-8 GSE109524.NANOG.HUES-8 332 bp overlap

ChIP WA01 ERP004238.NANOG.WA01 308 bp overlap

ChIP WA01_3IL ERP004238.NANOG.WA01_3IL 309 bp overlap

ChIP WA09 GSE105028.NANOG.WA09 332 bp overlap

ChIP WA09_heat-shock GSE105028.NANOG.WA09_heat-shock 331 bp overlap

ChIP hESC GSE18292.NANOG.hESC 177 bp overlap

NR1I3 1 dataset

Motif ES_0h ES_0h-NR1I3_MA1534.2 8 bp overlap

NR6A1 1 dataset

Motif ES_0h ES_0h-NR6A1_MA1541.2 14 bp overlap

Neurod2 1 dataset

Motif ES_0h ES_0h-Neurod2_MA1993.2 6 bp overlap

Olig2 1 dataset

Motif ES_0h ES_0h-Olig2_MA1997.2 6 bp overlap

POLR2A 2 datasets

ChIP stomach ENCFF607ZPU 226 bp overlap

ChIP stomach ENCFF820WZN 122 bp overlap

POU5F1 6 datasets

ChIP H1 ENCFF698ZAP 205 bp overlap

ChIP HUES-8 GSE109524.POU5F1.HUES-8 328 bp overlap

ChIP WA01 ENCSR000BMU.POU5F1.WA01 189 bp overlap

ChIP WA09_heat-shock GSE105028.POU5F1.WA09_heat-shock 233 bp overlap

ChIP hESC_NAIVE GSE69646.POU5F1.hESC_NAIVE 332 bp overlap

ChIP hiPSC GSE56567.POU5F1.hiPSC 227 bp overlap

PPARG 1 dataset

Motif ES_0h ES_0h-PPARG_MA0066.2 19 bp overlap

RARA::RXRA 1 dataset

Motif ES_0h ES_0h-RARARXRA_MA0159.1 17 bp overlap

RBPJ 1 dataset

Motif ES_0h ES_0h-RBPJ_MA1116.2 6 bp overlap

RXRA::VDR 1 dataset

Motif ES_0h ES_0h-RXRAVDR_MA0074.1 15 bp overlap

SIX1 1 dataset

Motif ES_0h ES_0h-SIX1_MA1118.2 9 bp overlap

SIX2 1 dataset

Motif ES_0h ES_0h-SIX2_MA1119.2 11 bp overlap

SMAD2-3 1 dataset

ChIP HGrC1_WT GSE138496.SMAD2-3.HGrC1_WT 61 bp overlap

SMAD3 1 dataset

ChIP BG03 GSE21614.SMAD3.BG03 227 bp overlap

SMARCA4 1 dataset

ChIP hiPSC_WT GSE124903.SMARCA4.hiPSC_WT 255 bp overlap

SMARCC1 1 dataset

ChIP hiPSC_WT GSE124903.SMARCC1.hiPSC_WT 254 bp overlap

SOX2 2 datasets

ChIP hESC GSE18292.SOX2.hESC 102 bp overlap

ChIP hiPSC GSE56567.SOX2.hiPSC 298 bp overlap

SPIB 1 dataset

Motif ES_0h ES_0h-SPIB_MA0081.3 13 bp overlap

STAT1::STAT2 1 dataset

Motif ES_0h ES_0h-STAT1STAT2_MA0517.2 13 bp overlap

Six4 1 dataset

Motif ES_0h ES_0h-Six4_MA2001.2 7 bp overlap

Tcf12 1 dataset

Motif ES_0h ES_0h-Tcf12_MA0521.3 6 bp overlap

Twist2 1 dataset

Motif ES_0h ES_0h-Twist2_MA0633.3 6 bp overlap

VDR 1 dataset

ChIP LS180_125 GSE31939.VDR.LS180_125 227 bp overlap

ZNF462 2 datasets

ChIP GM23338 ENCFF896CCA 211 bp overlap

ChIP GM23338 ENCSR334UWP.ZNF462.GM23338 282 bp overlap

ZNF528 1 dataset

Motif ES_0h ES_0h-ZNF528_MA1597.1 17 bp overlap

Zfp809 1 dataset

Motif ES_0h ES_0h-Zfp809_MA2125.1 9 bp overlap

Genome Browser